FMO04346.5prime Sequence
451 bp (451 high quality bases) assembled on 2008-07-30
> FMO04346.5prime
GTATAGCATACATTAAACGAAGTTATCAGTCGACATGCCAATAATCAAGA
AGTTCTGCTATTGTTTTAGTCTAAGAATTGGCGCATTTTCAATTGCGTAC
GCAGGTCTTACAATGGATGTATTAGATACAGTAGCGACTATATATACTAA
GTCGCAATATTGCGCTGATATACTACTCCTCTGGATAATTTCCACCATTT
GGAATATCATTTCCGCATTGGTTCTTTTGACTGCACTTTTTCGGGAAAAT
CCGCATTTGCTGCCAGTTCATCTGGTGACTTCTCTTTGTGGCCTGATGCT
CGAAATGACCAATCACATGGTGATTGCCTCCCTTGGCAGAACCGATTACG
TTTTGATATCCTATGCGTTCATTATGATTGCCTTTGTATCTGCGGACGTC
GTGATCGTGCTGAGCTACTACCAATCGGAGGTTGCAAGCTTTCTAGACCA
T
FMO04346.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ms(2)35Ci-RC | 1489 | CG31733-RC | 213..611 | 35..433 | 1995 | 100 | Plus |
ms(2)35Ci-RA | 1127 | CG31733-RA | 213..611 | 35..433 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15292737..15292947 | 35..245 | 1055 | 100 | Plus |
2L | 23513712 | 2L | 15293003..15293147 | 239..383 | 710 | 99.3 | Plus |
2L | 23513712 | 2L | 15293209..15293258 | 384..433 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:23 has no hits.
FMO04346.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:40 Download gff for
FMO04346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ms(2)35Ci-RA | 204..611 | 25..433 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:49:35 Download gff for
FMO04346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ms(2)35Ci-RA | 127..534 | 25..433 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:33 Download gff for
FMO04346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ms(2)35Ci-RA | 204..611 | 25..433 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:33 Download gff for
FMO04346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15292735..15292946 | 32..244 | 99 | -> | Plus |
2L | 15293009..15293147 | 245..383 | 100 | -> | Plus |
2L | 15293209..15293258 | 384..433 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:40 Download gff for
FMO04346.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15292735..15292946 | 32..244 | 99 | -> | Plus |
arm_2L | 15293009..15293147 | 245..383 | 100 | -> | Plus |
arm_2L | 15293209..15293258 | 384..433 | 100 | | Plus |