FMO04347.5prime Sequence
897 bp (897 high quality bases) assembled on 2008-07-30
> FMO04347.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGAATTTGGAGTTCT
TCACCGAGGGCCTCGACTGCCTAATGTACTGCGGCATGAAGCTGTCGCCG
GAGCAGCGCATCTTGATTGAAAACTCGCTGATCGCTTTACAAAATGACAA
TCGTTTTACGGGCATGTATCTTTGGGGTCGCATTACGGCCACCAAGAACG
ATTACTACATTGCCTTTGGCTACACTAATGACTGTCTCAAGGATCGCAAG
TATTTCTACAGTCTGGACCAGTTCCAATGGCAGTTGCTGCCGTTCGTACA
GAGCCCCAAGATATTTCAGGCGACTATATTGGCAAGGGAGCCATTTATAG
GAGATCCCAGCCTGATGACCTACGTTAAGCTGGACCCCACTTTTGACATC
GTAGGCAATCAGGTGGCTGGTATCAGCCGCCCTGAAGTGGTCAAGCTTAA
GGAGGAGGAACGGCTGGCAGCCATTGTGTTTATTATAACAGAGGAGTGTG
CCATTTGCCCACGCGGAGCCTTTTACAAGATGACCGATGGTCGTGTTATA
CCCAACCAGATGTTTCGTGGACTGAATGACTTGCAGATCGACAACCAATC
ATATTACCAGCTCTATCGCCTGCCCCGCAATGATCTCAAAGTCAATTTGG
CCAAGAGGAGCGACTATAACTATGCTATTGACTTTCTGGACACCATTGAC
TGCGTAATACCACTGTGTCAGGCTTTTGCCCTGAATATGCAACGGAACGA
GGGTTTGGTAATAATCAAGTCGTGCCTTTGGTTGGGCATGACATTCTTTC
ACAAAATCAACTCCCACAAGCATGGTTTCCTTTACTTGGGCGATGGCAAA
GAAGAAACTTTGACTTGCTTTTCATGTATGCAAGCTTTCTAGACCAT
FMO04347.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31803-RA | 929 | CG31803-RA | 42..889 | 30..879 | 4185 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17411689..17412184 | 879..382 | 2390 | 99.6 | Minus |
| 2L | 23513712 | 2L | 17412239..17412592 | 383..30 | 1755 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:58 has no hits.
FMO04347.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:09 Download gff for
FMO04347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 33..899 | 20..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:42 Download gff for
FMO04347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 33..899 | 20..890 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:23 Download gff for
FMO04347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31803-RA | 33..899 | 20..890 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:23 Download gff for
FMO04347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17411679..17412183 | 383..890 | 98 | <- | Minus |
| 2L | 17412240..17412598 | 25..382 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:09 Download gff for
FMO04347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17412240..17412598 | 25..382 | 98 | <- | Minus |
| arm_2L | 17411679..17412183 | 383..890 | 98 | <- | Minus |
