FMO04350.5prime Sequence
700 bp (700 high quality bases) assembled on 2008-07-30
> FMO04350.5prime
TTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGGAAACCATTT
TGGGTGTTAAAGGAACTGATTTCATCATACTGGCCTCGGATACCATGAGG
AACAAGTCGGCGATGTGGCTGGATGACGAGGTCAGAAAGACTCACCGCAT
CTCGGACTACTGCATGATGTCGACCGCTGGGGACGGTGGAGACTGCCTGA
AGTTCTCGGATTTCATCCTCCGGAACATGGATCTTTACAAGATAACCAAC
GGATACGACTTAACCGTTCGCGGAGCGGTGCACTTCATCCGGAGGCATTT
GTCCGCCTATTTGAAGAGCGATTGCACGTTCCAGGTGTCGCTGTTGGTGG
GCGGATACGATTTGACCAGCGGTCCCGAGTTGCACTACATCGATTATTTG
GGTAACTCGGTTCCCGTTCGGTACGGTGGCCACGGAGCCGCCATGAACTT
CTGCACTCCCATTCTCGAGGAGTTCTACAAACCGGACATGGATACGCAGG
CAGCCTATGATGTTATCAAAAAGTGTGTGATTGAGCTGTATAAACGATTC
GTTATCAACTTGCGCAACATAGATTTGTTCCTGATAAGCAAAAATGGCAT
AACAAAGATGAATAGCATCAACCTGGAGTCCCTTAGAGGGGATATCTTAG
CTGGTCCCAAGCGAAGGATATTAAACACAAAAGCAAGCTTTCTAGACCAT
FMO04350.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta4R1-RA | 830 | CG17301-RA | 102..746 | 38..682 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2653288..2653842 | 128..682 | 2775 | 100 | Plus |
| 2L | 23513712 | 2L | 2653147..2653237 | 38..128 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:56:13 has no hits.
FMO04350.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:53 Download gff for
FMO04350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R1-RA | 102..749 | 38..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:20 Download gff for
FMO04350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17301-RA | 36..683 | 38..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:02 Download gff for
FMO04350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R1-RA | 102..749 | 38..686 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:02 Download gff for
FMO04350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2653147..2653237 | 38..128 | 100 | -> | Plus |
| 2L | 2653289..2653845 | 129..686 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:53 Download gff for
FMO04350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2653147..2653237 | 38..128 | 100 | -> | Plus |
| arm_2L | 2653289..2653845 | 129..686 | 99 | | Plus |
