FMO04351.5prime Sequence
1212 bp (1058 high quality bases) assembled on 2008-07-30
> FMO04351.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCGGATGCAAAAG
AGCAACCAGAATGGGGCATAAAGCTCTCAAAATTCTTTGTATTACCCCAA
CGCTGGATTCTGGCCATCATGGGATTCTTTGCCATCTTTAATGCATACAC
CATGCGGATATGTCTATCCCAGGCCATCACAGTGCTGGTGGTGAAGAGGA
ATTATACTATTTTCCACACCGAAGCGATATGTGAACCGGATGACCAGTCT
GATCCCTCGAGCACTTTCGAGGGAGGCGACTATGATTGGTCGCAGGAGAA
ACAGGGTCTAATCCTGGCCTCTTTCTACATTGGCTATATTGTAACTCATT
TGCCTGGTGGAATTCTGGCTGACAAATTTGGCGGAAAGTGGACACTGAGT
CTTGGAATCTTTTTTACGGCTATTTTTACATTGCTGACACCCGTCTGCAT
TGTTTATGGCGGTGCCGATGCATTAATTGTCCTCCGCGTACTTATGGGAC
TCGGTGAAGGAACCACTTTCCCCGCACTCAGCGTTTTGCTAGCCAGCTGG
GTACCGGCAAACGAGCGAGGAATGCTGGGAGCCCTTGTACTCGGCGGTGG
TCAGATGGGTAGCATTGCTGGTAACATTATTTCTGGCTATGTACTCAGCT
CCATGGACTGGCCATGGGTATTCTATGTTTTTGCGATCATCGCCCTTGTC
TGGTTTGTCGTTTTCACGCTAGTGTGCTTTAGCAGTCCATTCACTCATCC
ATATATCAAGCCAGAGGAACGTGCGTTCTTGGCACAGGAGGTACCGCCGC
CGGATAAGAACAAGCCGAAGACACCATTTTTTGCCATATTAACAAGCATA
CCCATGTGGGCATTGATCAGTGCTCAAATCGGACACGATTGGGGTTTCTA
TATTATGGTCTCCTACCTGCCAAAGTATATGTCGGATGTGCTGCGGTTTT
CGATTAAGTCGAATGTCTCTACTCTCACTGCCCTACGTACATGTGGATCA
TGTCGCTGCTCAGCGGCTGTGTGGCGATCAATGATCAACGCACTGCATGA
GCACCACAACACGCGCAAATAATGACAGATGCCGCTTTGGACGCTGTCTT
CATGTACTGCATCATGCTGATGCATCAGGCATGTCGTGTCCTAATCCAAT
TACCATGCTGATGACCTATAGGCTGCATGACTACGCAATTGACAGTGAAG
TCGAAAATTGAC
FMO04351.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9254-RA | 1684 | CG9254-RA | 190..1338 | 35..1157 | 5055 | 97.4 | Plus |
| dmGlut-RA | 2426 | CG5304-RA | 357..502 | 56..201 | 280 | 79.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13596003..13596997 | 1025..35 | 4780 | 99.4 | Minus |
| 2L | 23513712 | 2L | 12031902..12032010 | 93..201 | 275 | 83.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:14:21 has no hits.
FMO04351.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:28 Download gff for
FMO04351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1300 | 27..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:22 Download gff for
FMO04351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1300 | 27..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:17 Download gff for
FMO04351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9254-RA | 183..1300 | 27..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:17 Download gff for
FMO04351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13595887..13596997 | 35..1124 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:28 Download gff for
FMO04351.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13595887..13596997 | 35..1124 | 98 | <- | Minus |
