FMO04353.5prime Sequence
426 bp (426 high quality bases) assembled on 2008-07-30
> FMO04353.5prime
CATAATACGAAGTTATCAGTCGACATGAGTGAGTCCGCATCTGAGGACAC
AGATTCTGAAGGGGTTGCTGCCGTGCCAGTTCCCGATACCACGCCTCGCG
ATGCGGACGCCACAACTTCCGGAGCCCGGATGATGATGCAACACCCATGG
TTGACGGCAGCCGGAGTTGCCGTCTATGCCACCAGAGTCATTTGGGTCAA
GTTGCGTGTGCTCCGGTTGGCCAAACAGTTGCGCCTCCAGAAGCAAAGAT
TTTGGAAGTCTAATCCCTGGCAGGACAATGAATCTGGCTCTGAGGCAGAG
AGTGATACCGATGGCGAGGAAGGCGATTCTGACGAGTCTACAGATACAGA
TGTGAATCGTAATAGAATTGAAGCTACTGATAATGATCGGTTAGTCCGAG
TGCCGCAAGCAAGCTTTCTAGACCAT
FMO04353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18469-RA | 509 | CG18469-RA | 7..392 | 23..408 | 1930 | 100 | Plus |
| CG12699-RB | 766 | CG12699-RB | 164..268 | 124..228 | 225 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17245886..17246271 | 408..23 | 1930 | 100 | Minus |
| 2R | 25286936 | 2R | 17247028..17247132 | 228..124 | 225 | 81 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:29 has no hits.
FMO04353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:12 Download gff for
FMO04353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18469-RA | 1..398 | 18..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:23 Download gff for
FMO04353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18469-RA | 1..398 | 18..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:07 Download gff for
FMO04353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18469-RA | 1..398 | 18..417 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:07 Download gff for
FMO04353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17245879..17246276 | 15..417 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:12 Download gff for
FMO04353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13133384..13133781 | 15..417 | 98 | | Minus |
