FMO04354.5prime Sequence
772 bp (772 high quality bases) assembled on 2008-07-30
> FMO04354.5prime
TTCGTATAGCATACATAATACGAAGTTATCAGTCGACATGTCCAGCGATC
AGGTGAATTCCCAAACGGAAATGGAAACGGAAGCGCGAGCGCGAGCGGAG
GTGGAAGTGGAGGTCGAACCAGAAGTGCTCTCGAGAGCCAGTGTGGCCAG
CTCCGTAGAAGAGACGGCACCCAGCACCAGTCACAGTGCATCGGGAAAAT
CCACCGAGGCACCACTTACTGGTTGTGTGGTGCGAATTAAGAGCGAACTG
CAGGACATTCGGAAAAATCCGCCACCGAATTGCACCGCCGATTTGCATCA
CGGGGATCTTCTTCACTGGACGGCAGGTGTGAACGGGCCAGTTGGCTCCG
TATACGAAGGCGGTCACTTCCGGCTGGATATACGATTTCCGGCCAGCTAT
CCATTCCGGGCGCCACGCATTCGGTTCACCACCCGAATATACCACTGCAA
CGTGGACAGTCGCGGCGCCATTTGCCTGGATGTCCTCGGCGAACGATGGT
CCCCAGTGATGAATGTGGCCAAGGTTCTACTTTCCATTTACGTGCTGATG
AGTGAGTGCAATCCAGATGATCCGCTAGTCATGTGCATTGCCGATCAGTA
CAAAACCAATCGCAGGGAGCACGACAAAATTGCTAGACACTGGACCAAGC
TGTTTGCAATGACCAAGGCGCAGGATAAGAACAGAGAAAAGGATGCGGAT
CAGGGTAATGAGCAAAATCAGGAAGAAAATCCAATGCCAGGACAGCAAGG
AAATGCAAGCTCTCTAGACCAT
FMO04354.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2574-RA | 896 | CG2574-RA | 95..811 | 38..754 | 3555 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12408955..12409442 | 38..525 | 2440 | 100 | Plus |
| X | 23542271 | X | 12409508..12409740 | 522..754 | 1135 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:56:40 has no hits.
FMO04354.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:12 Download gff for
FMO04354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 86..814 | 28..758 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:17 Download gff for
FMO04354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 58..786 | 28..758 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:18 Download gff for
FMO04354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2574-RA | 86..814 | 28..758 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:18 Download gff for
FMO04354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12408941..12409440 | 21..523 | 98 | -> | Plus |
| X | 12409510..12409743 | 524..758 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:12 Download gff for
FMO04354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12303543..12303776 | 524..758 | 98 | | Plus |
| arm_X | 12302974..12303473 | 21..523 | 98 | -> | Plus |
