FMO04355.5prime Sequence
919 bp (919 high quality bases) assembled on 2008-07-30
> FMO04355.5prime
GTATAGCATACATAATACGAAGTTATCAGTCGACATGTTCCGGAATCAGT
ATGACAACGACACAACCACTTGGAGTCCGCAGGGTCGTCTCTTCCAGGTG
GAGTACGCAATGGAGGCGGTGAAACAGGGAGCAGCCACCGTGGGACTCAA
AGGCACCGACTATGCCGTGCTGGCCGCCCTGTGCCGCACCTCAAAGGACA
CGAACACGCTCCAGCGGAAGATCATGCCGGTGGATGACCACGTGGGTATG
TCTATCGCAGGACTAACGGCAGATGCCCGCGTGGTGTGCCAGTACATGAG
GACGGAGTGCATGGCATATCGGCACTCCTATAACGCAGAATTTCCGGTTC
GCCGTTTGGTTTCCAATCTGGGTAACAAGCTGCAGACCACCACCCAGCGC
TATGATCGTCGTCCCTACGGTGTGGGCTTGCTGGTGGCTGGATACGATGA
GCAGGGACCACATATCTACCAGGTGATGCCCACGGCCAATGTGCTCAACT
GCAAGGCAATGGCCATTGGATCTCGTTCGCAGAGTGCTCGCACATATCTG
GAGCGAAATATGGAGAGTTTCGAGGACTGCGACATGGATGAACTGATATG
TCATGCCATTCAGGCCATTCGAGGATCGTTGGGTTCCGATGATGTCGAGA
ATCTCACCATAAATGTGGCCATTGTGGGCAAGGATGTGCCGTTTAAAATG
TTTACGGAAGCCGAGAACCAGAAGTATGTGAAATTGGTCAAGGCTATGGA
TCCACCTCTGGAGGCGGACCACGATCCTCTATCCGAGGAGGGAATGAGCG
ATGATGACATGACGGACCACGGACCGAGTAGCAGTGGAGTTCCACCCAAT
GATACATCTGACATGGAAACCACTGCATCCACCGGCGGCAGTGACGCACA
TGCAAGCTTTCTAGACCAT
FMO04355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosalpha6T-RA | 1020 | CG5648-RA | 69..936 | 34..901 | 4325 | 99.9 | Plus |
| Prosalpha6-RA | 1027 | CG4904-RA | 129..611 | 71..553 | 395 | 73 | Plus |
| Prosalpha6-RB | 1070 | CG4904-RB | 129..611 | 71..553 | 395 | 73 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13232107..13232974 | 34..901 | 4325 | 99.9 | Plus |
| 2L | 23513712 | 2L | 10221547..10222029 | 71..553 | 330 | 71.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:53 has no hits.
FMO04355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:26 Download gff for
FMO04355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha6T-RA | 69..942 | 34..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:25 Download gff for
FMO04355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha6T-RA | 69..942 | 34..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:32 Download gff for
FMO04355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha6T-RA | 69..942 | 34..908 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:32 Download gff for
FMO04355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13232107..13232980 | 34..908 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:26 Download gff for
FMO04355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13232107..13232980 | 34..908 | 99 | | Plus |
