FMO04356.5prime Sequence
492 bp (492 high quality bases) assembled on 2008-07-30
> FMO04356.5prime
ACTTCGTATAGCATACATAATACGAAGTTATCAGTCGACATGAACTGCAT
ATTTCTTATGTGCTCCCTGCTTGGCATCTCTTTCGCTATAGTGATCGAGG
CCAACTGTCTGCGGGGTACAGGCCACATGTGGCAGCAGAAGCCACCCACC
AGCACAAACAGTTGCAATCGACCGTTATCTCTGGCTAGAAATGGAACATC
AATGGGAAAACGAGCAACGTCTGCAGTCGACATTCCAGTAGCTACAATGG
GAGCACCAGGTCCGGAGGTTGAAGCAACCTTAGCTGCTCCTCCTGCGGTG
TTTCTGGCCAACTACGTCTATGAGTGCGCCATTCGTCGCACTGCAAACAG
TTGCAGCAGACCACCAGGGTCGGAGCCGGAATCGAAGCCGGAACTTGAAT
CCGGACCGGAGGTGCCTAAGCCCCGAACTGTGACACTGGCAGCCGGCGAA
CTGGAAGGGTTCGGGCCAACTGAGGCAAGCTTTCTAGACCAT
FMO04356.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31093-RA | 585 | CG31093-RA | 17..451 | 40..474 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25789953..25790342 | 474..85 | 1950 | 100 | Minus |
| 3R | 32079331 | 3R | 25790410..25790455 | 85..40 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:50 has no hits.
FMO04356.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:38 Download gff for
FMO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31093-RA | 17..457 | 40..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:41:52 Download gff for
FMO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31093-RA | 17..457 | 40..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:32 Download gff for
FMO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31093-RA | 17..457 | 40..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:32 Download gff for
FMO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25789947..25790341 | 86..479 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:38 Download gff for
FMO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21615669..21616063 | 86..479 | 99 | <- | Minus |
