Clone FMO04358 Report

Search the DGRC for FMO04358

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:43
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13021-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04358.5prime Sequence

387 bp (387 high quality bases) assembled on 2008-07-30

> FMO04358.5prime
ACTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGTCGGACTA
CTCAAAGTTTCTGTCCAACTTGACGGATCAGCTGGCACTTCTGCCTAAAG
TTGCGCCCAAAGGATTGGGACGATTGGGCAGCCTGGAGAACTTGGGCAAT
AATCTGGGCAATCTGCGCCCCGCCCACAAGGCTCTGATGTGCGTGGGCGT
GGCCACTGTGGCTTGCGTTGTCCTCGGCTTCACTGTTAAGTCATTAAAGG
GACATAGCCGCAAGGACAAGCAAAGGATCATCAATGTACGAATCGGTAAT
CCGATCAAGCGGGAACTCGAGGGGGCTGATAAGGACGAAGGATCCTTTGG
GAAGGAAGAAGAACTCAATGCAAGCTTTCTAGACCAT

FMO04358.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG13021-RB 611 CG13021-RB 114..443 40..369 1650 100 Plus
CG13021-RA 597 CG13021-RA 100..429 40..369 1650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3515260..3515589 40..369 1650 100 Plus
Blast to na_te.dros performed 2014-11-28 20:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 2659..2709 43..91 105 72.5 Plus

FMO04358.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:30 Download gff for FMO04358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13021-RA 93..429 34..369 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:52:02 Download gff for FMO04358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13021-RC 330..666 34..369 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:28 Download gff for FMO04358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13021-RA 93..429 34..369 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:28 Download gff for FMO04358.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3515253..3515589 34..369 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:30 Download gff for FMO04358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3409286..3409622 34..369 99   Plus