FMO04361.5prime Sequence
709 bp (709 high quality bases) assembled on 2008-07-30
> FMO04361.5prime
TAGCATACATAATACGAAGTTATCAGTCGACATGAACCGCATCGACCTTA
CCCTGGACGACATGGCCAACAACAAGTTCCTCACCATGTACAGTACTTTG
ATCAAGAGCTTCGCTGCCTCCACGGAGTTTTCCACCAACGAAGTGGTCAG
CTTGCTGATCGTGTTTTACAAGTACGCCCTGAACAACAGGTCCCGCATGA
TGTCCACCAGCCAGCTGTACAATCTATTCCTCGTCAGCTTTGGGATCTTC
GACGTGACCATCATCGACCGGATTTCGATGAATATCACGCAGGATGGCCG
ATCAGTCTCTCCAGAAGCCTGGATGCGGCTGTTCTGTGTGTTCTTCAACG
GAAGTCTGCAGGAGCGAATGAAGTTCGCATTTGAGGTTTATACAAGCGGT
GGTGCTGTGGTTCTGAATCGCGAGGTGGTCGGCGTGGCCATTGAACAATT
CTTCACTGGCGATGACGACGACGAGGTCAACGAATTGCGAGCGGACATGT
GCGAGTTCATATTCGGAAAATTCGACACTGACAAGGATGGGGTGATAGCG
TTTGAAGAGTACGCCGAAATTGTACAGAATCAGCCTGGATTGCTCGAGTT
TTTGGGTAAAATATTCCCGGATGACAAGGACAGATCACTGGTGGCGTACT
GCCACAACATTGAGTCTATGTTTCCGCCAGAAGGTTTATATGCAAGCTTT
CTAGACCAT
FMO04361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sunz-RA | 921 | CG15179-RA | 95..754 | 32..691 | 3300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6630245..6630600 | 32..387 | 1780 | 100 | Plus |
| 3R | 32079331 | 3R | 6630819..6631017 | 493..691 | 995 | 100 | Plus |
| 3R | 32079331 | 3R | 6630652..6630762 | 384..494 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:14:31 has no hits.
FMO04361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:34 Download gff for
FMO04361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sunz-RA | 91..757 | 24..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:41:54 Download gff for
FMO04361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sunz-RA | 92..758 | 24..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:25 Download gff for
FMO04361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sunz-RA | 91..757 | 24..695 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:25 Download gff for
FMO04361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6630241..6630598 | 24..385 | 98 | -> | Plus |
| 3R | 6630654..6630761 | 386..493 | 100 | -> | Plus |
| 3R | 6630820..6631020 | 494..695 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:34 Download gff for
FMO04361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2455963..2456320 | 24..385 | 98 | -> | Plus |
| arm_3R | 2456376..2456483 | 386..493 | 100 | -> | Plus |
| arm_3R | 2456542..2456742 | 494..695 | 99 | | Plus |
