FMO04370.5prime Sequence
1249 bp (1038 high quality bases) assembled on 2008-07-30
> FMO04370.5prime
TCGTATAGCATACATAATACGAAGTTATCAGTCGACATGTTTGAGAACTC
CCTGTTTATCATTAAGCCGGACTATCTGCACAAGCGGCGTCCGGTGCTCT
TAAAGTTGCTGGCCGAGGGCTTCCAGATTCAGGGTAATCGACGGATTGCC
TTTTCGCCAGAAACTGCCGCCGAGTTCTATGCCGATTATGCCGATGAAAA
GGGGTTTATGCTGGAGGTCATTCTGCTTTCGAAGGGTGTTTCCGAGGCGT
TCATAGTTACGAAGGAAAACGCCGTGCAGGAGCTGCTCAACATCATGATT
TGTTATTTTGGTTCGGCATCGGATCTGGAACGCAATATCCATGTCACCAA
GAACAGTTACAGCGTGGCTCGTGAGATAAACTTTATTTTTCCCAACTATA
TTCACGAGCCCCATCAAATGTTCGACCACAACAACTTCTGCAACAGGCCG
ATGCTTAAGCCGCTGCTCGAGGAGATCTACGACATAATGCAGAACACCGA
CTGCAGCCAGGAGAACTGGAAGGTGCGTGTTTCCGATTACCTGGTGCGCA
GCAATCCAAAGATGCCGGAAATCAGCAACCAGTGCCAGCAGCGACCGGAT
GTGGCTATCCAGGACAAATCGCAGCAGACCACCATGACCTATGCTCCGAA
GCCAAGTGCGCGGGCCGCGCAGCCGGGAGTCAAGAAAACGCAGAGCAGCA
GTGCACCCTTGTCCACCACATCCCCGCATTCCTCAATGCTGCTCTCATCG
TCTTCCTGTGTCACCTGTGGAGGCTTCGAAAGATCTCAGCCCGGTATTTC
GGATCTGGACCTTAATAAGCGCGTAGAACCTCATGACGAGGAGCCAGTCT
GTGTGGACGAGGAGATTTTGTGGAAGGAAGTTATTGTCTACGAGGAAATC
CAACCGGAGGCTGAGGAGCAGGAGTCCAAGGAGGACCTGCACGACCTGGA
GGAGGAAGGCGTAGGCGAGTCTGGGGGCTCAGATGCGAAGTCAGACCGAA
ATTGTTCATGGAGCTCCACCGCCACCAAGCTCAAGATGACGAGGTCCGAG
AGGGTGACGCTTGCTGCCTGGGGGAGCCAGGCGGACTGCTCCCGCTTCTG
AAGTGGCTCTTCCTGCCAGAAGGCTACTGGCTGCCACTGAGATTCTTGCA
TGACTGAAAGACATCTCCTACGCACCGAGCTCGTGAAGGAGCCTCACAGA
GGAGAGCAGGCTTCCGACACACTCGTGTTACGCGCGCGGGCCTCACAAT
FMO04370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15547-RA | 1601 | CG15547-RA | 101..1194 | 33..1129 | 5155 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30882212..30882927 | 1117..398 | 3175 | 97.6 | Minus |
| 3R | 32079331 | 3R | 30883128..30883403 | 308..33 | 1380 | 100 | Minus |
| 3R | 32079331 | 3R | 30882983..30883071 | 397..309 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:24:35 has no hits.
FMO04370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:32 Download gff for
FMO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15547-RA | 92..1198 | 25..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:27 Download gff for
FMO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15547-RA | 92..1198 | 25..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:49 Download gff for
FMO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15547-RA | 92..1198 | 25..1134 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:49 Download gff for
FMO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30882188..30882927 | 398..1146 | 96 | <- | Minus |
| 3R | 30882983..30883071 | 309..397 | 100 | <- | Minus |
| 3R | 30883128..30883410 | 25..308 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:32 Download gff for
FMO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26707910..26708649 | 398..1146 | 96 | <- | Minus |
| arm_3R | 26708705..26708793 | 309..397 | 100 | <- | Minus |
| arm_3R | 26708850..26709132 | 25..308 | 98 | | Minus |
