FMO04372.5prime Sequence
720 bp (720 high quality bases) assembled on 2008-07-30
> FMO04372.5prime
CTTTATACGAAGTTATCAGTCGACATGCCAATATTCGTGAAAAACCTGCC
ATGCATTCGCCACCTGGCCAAGCGGAGTCTAATTGAGGGGCGGCGCTGGA
TATCGGGCCTAGAGAAAGGTCAAAACAGCGCAGCCCAAAACGTAAATCCC
TGCCACAAGGACTGGCCCATGAGAGAGGAGTCTTTTGCGGCAGCCCAGCT
GCTCCGCCAGAGGCAGCAGAACCGCCGGTGGAGCAACAACTACTCCGGCC
TGGACTCCGCCATGTTCCGACCAGTTGCCAAACCGGATGAGATGGTGCCC
CGCCGCAACAATGTGGTGGCCGCCCAGAACGCGGCCAGGAGGCGGAACTT
CAAGTCGGCGCAGGTGTCCCAATACCAGCAGAGGCAGGAGGAAGAGCAAA
GACTGGACGGCGATCCAGAAGCCAAGGCCGAGGAGCACGACTACGAGTCG
GATCTGGAGGTTCGATCGGTACGGGAGACCGTTTTCGGACCGCCGGAGGA
CAACTCGGAGGAGGAGATGGATCGCGCCCGGGCTGAGCAGGAGCTTCTCC
AACGCGTGGCCAGCGCCTCCAAGCAAACGGAACGTTTGCCCGATAGCGCC
TCCATTTCCCGAAAGGTCATCTCGCCATACAACTCCTACCGCAGCCATCG
CACCCGCTGGGCGGAGTTCCGGCACAACATGATCTTTGGCCGTACGAGTT
ACGCAAGCTTTCTAGACCAT
FMO04372.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30376-RA | 941 | CG30376-RA | 134..811 | 25..702 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8263616..8264293 | 702..25 | 3390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:58 has no hits.
FMO04372.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:28 Download gff for
FMO04372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 25..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:07 Download gff for
FMO04372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..814 | 25..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:56 Download gff for
FMO04372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30376-RA | 134..816 | 25..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:56 Download gff for
FMO04372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8263611..8264293 | 25..708 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:28 Download gff for
FMO04372.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4151116..4151798 | 25..708 | 99 | | Minus |
