FMO04378.5prime Sequence
432 bp (432 high quality bases) assembled on 2008-07-30
> FMO04378.5prime
TCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCCACCGCTCT
GAAGGAGGCATCCGAGAAGCTCCGCTTCGCCCCGGCCACCGTCAATCTGT
TGGGTCTGCTGGCTGACAACGGACGTCTAAAGAAGCTGGACACCGTGATC
AATGCCTACAAGACCATCATGGCCGCACATCGCGGTGAGGTCGTCTGCGA
GGTGGTCACCGCCAAGCCCTTGGATGCGTCCCAGAGCAAGCAGCTGGAGG
GTGCCCTTAAGTCTTTCCTGAAGGGCAACGAGTCTCTGAAGATCACTTCC
CGCGTGGACCCCAGCATCATTGGTGGCCTGATCGTTTCCATTGGCGACAA
GTACGTCGACATGAGCATTGCCACTAAGGTCAAGCTCTACACCGATGTCA
TCCAGACCGCTGCCGCAAGCTTTCTAGACCAT
FMO04378.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Oscp-RA | 802 | CG4307-RA | 319..697 | 36..414 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15266145..15266370 | 36..261 | 1130 | 100 | Plus |
3R | 32079331 | 3R | 15266431..15266585 | 260..414 | 775 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:48:33 has no hits.
FMO04378.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:02 Download gff for
FMO04378.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oscp-RA | 315..697 | 30..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:49:45 Download gff for
FMO04378.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oscp-RB | 375..757 | 30..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:55 Download gff for
FMO04378.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oscp-RA | 315..697 | 30..414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:55 Download gff for
FMO04378.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15266141..15266370 | 30..261 | 98 | -> | Plus |
3R | 15266433..15266585 | 262..414 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:02 Download gff for
FMO04378.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11091863..11092092 | 30..261 | 98 | -> | Plus |
arm_3R | 11092155..11092307 | 262..414 | 100 | | Plus |