FMO04380.5prime Sequence
1230 bp (1018 high quality bases) assembled on 2008-07-30
> FMO04380.5prime
TCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGAGTACTCATCA
GTATAGCCTGGGGAGGCTGGCCCGCCGAGGCTTCAGCCTGCGGATGAATC
CGCTGGCCGGCACACTGCAAAGGCTTTACCACACCCGTAGCAGGCCATGT
GTGGCCCAGAGTGTGAGCCAGGTGGGTGAACGGTCCAAGCCAACGTTGCA
GCCCTACGACTTCGACCGAAGCCGGGTGCGTAAAATTGCCGGCGAGAGGA
AGACGCTGGTCGACCAGGTGCGGGGCATGAGCACAAGCCTGGGACATGCC
AAGTTGGTGCCCCAAAAGATGTACGGCAAGACGAGGCTGTTCTCCTCCGG
AAGCACCCTCTACAGTCGCTTGCAGCATCTGGAACAGCAGAACGAGGAAT
ATTCGAGTCGAGAGTCCCAGCCGACGCACACCACAGCCTCATTGTCGGCC
ACCCAGCAGAGGTACAATCAGGCGGCAGGATTCGGCAAGGGCATGGCCAT
ACAGACGGCCAAAGACATCAGCCAGTCCATCCAGGAGGAGCTGATGGTGG
TGGACGCCGACACGCGCGACATGCTTACCTGCGATACCAGTCGCAAGGCG
ATGCGCGACTACCACGACCATATGGCCAAGCGGTCGAAGAACTCTGTCGA
TCCCATGCAGGGTTGGAAGCATCCAAAGAACCTTAAGTATCTCTCCGATA
TCCCGGCCGATAGCAGTACCAGTAGCCAAAGCAGCCCAACATGACGATGA
AGCCCAACGGCAGATGAGGCCACGTCGCCGCCAGATGGTCATGGGTCATG
CCATTCGCAATTTCGACGCCCTAGCCAATCCCCCGCTTCATCTCGGCACC
GGACCCAGGTACGAGATGTATACCTCCAATGCTAAGGAGATGTTCTCAGA
GCATCGCAGCGAGCTGCGTCCGCAGACAAGTTGGCACAAGCCAAAGCCAG
CCGCCGAGGACAAGCCCGGAGGATCAGCTTATGGACGTGTCGATGATCCG
ACCAGAGCGTCCGGATATTACAGTGGCCAGGGTCTCTTGGAGGACGGAGG
AGGAACACACCCGAAGCCTGGAATTCGTGTACGAGCATGCCCAAGGCGAA
GCGCGGAGTCTTAAAGCAGGCCTTCCTCGGCGGAACCAGAGTCCCGGAAT
GTGGATACGTCCAGATGAACGACCTACCACGAATCTCGGAACATGGCTGC
TCGAATTATGGCTCCTCACCACGCTAGGAT
FMO04380.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31538-RA | 2158 | CG31538-RA | 240..1353 | 37..1154 | 5130 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5276501..5277596 | 1138..37 | 4930 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:03:25 has no hits.
FMO04380.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:06 Download gff for
FMO04380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31538-RA | 240..1233 | 37..1032 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:34 Download gff for
FMO04380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31538-RA | 240..1233 | 37..1032 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:30 Download gff for
FMO04380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31538-RA | 240..1233 | 37..1032 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:30 Download gff for
FMO04380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5276603..5277596 | 37..1032 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:06 Download gff for
FMO04380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1102325..1103318 | 37..1032 | 99 | | Minus |
