FMO04384.5prime Sequence
1016 bp (915 high quality bases) assembled on 2008-07-30
> FMO04384.5prime
ATAATACGAAGTTATCAGTCGACATGGACCACGCTATAACGCCGGAACCG
CACTTGGTGCCAGGTTACACGGGTCACTGCGCCCAGAATCGCGACCGAGT
GGGTCGAACTTATGGCCGTCAGACGCACAAGCTGTTAATAGACCCCTGTA
TTTACCACGCTCCCGAACTGATAGTGGCTCCCATTCATGCCAAGCGCGGC
CTCAAGGACTATCCCACAGAGCAGGAGCTGAAGATTCTGCGCACTCGTGA
GGGTTTGGTGGACTCCGTTTACCGACATCCCATATTACCAGGCTACGCCG
GATTTGTCCCGAACAAAGTGAGTCAGATTGGCAAGCGATATGTTGCTGCC
GCATCCGCTGGAGTGGCTCGGCATGAGACGCTGATGGAGTTGTATCGGTG
CGAGAATCGGACGCTCAGGCATCGGGATCTACTGGAGAGTGGGAACGGAC
TCTTCGACCGCAAGATCAACGAAAGACTGCTGCCACAAACCTACTACCGA
TCGCCCCTGATCCTGGTGACCGGAGTGTCCAAGGGCATTAAGGACGAAAC
TTGTCCGCCGAAAAACGGAGAAACTCTGCTATAGCAAGTTCACATCGCCG
CACTTCCTGGAGGATGAAGATGCCGACAAGTTCATAATCAATGGTTACTC
CGGCCACATTCCCATGTCAGTGACCCGATTCGGGGAGTCCAACAAGGTGC
TGACCAACCGGGCACTGTGCATCTTCTCGGACTATATGTACAAGCGGAAA
GCGGGGATACGTGGTGTTGTGGACAGGATCTCAGCCGGCCGTCCATCACC
TGCCCGCCCGTGGGACACTTCGTCGTCTATCACGAGGAACAGCGGAATGG
TGGCCCACTATGCGGGTCATGTTCCTGGGGGAGACGTACAAGTCCGGACG
CACCTACGCCAAAACACCATAGATGCGAAGCGCTGGGCTGGAAGGGGCAT
AAAAATCTTACAGTGGTGCCCGAAGTGGCCATTCTGGATTACGCCTACGT
AACTTTTCTAAACAAT
FMO04384.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18335-RA | 1346 | CG18335-RA | 165..1133 | 24..998 | 4440 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11289901..11290829 | 998..64 | 4045 | 97.2 | Minus |
| 2R | 25286936 | 2R | 11290892..11290932 | 64..24 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:21:29 has no hits.
FMO04384.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:16 Download gff for
FMO04384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18335-RA | 163..1133 | 21..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:47 Download gff for
FMO04384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18335-RA | 103..1073 | 21..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:13 Download gff for
FMO04384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18335-RA | 163..1133 | 21..998 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:13 Download gff for
FMO04384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11289901..11290828 | 65..998 | 97 | <- | Minus |
| 2R | 11290892..11290934 | 21..64 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:16 Download gff for
FMO04384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7177406..7178333 | 65..998 | 97 | <- | Minus |
| arm_2R | 7178397..7178439 | 21..64 | 97 | | Minus |
