Clone FMO04391 Report

Search the DGRC for FMO04391

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:43
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31740-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04391.5prime Sequence

230 bp (230 high quality bases) assembled on 2008-07-30

> FMO04391.5prime
GCATACATAAAACAAAGTTATCAGTCGACATGGTTCTGATGCTTTGCTGC
AGCTTCGATCCCTTCTACGTTGGACCCTGCCCACCCGGCTGCCTGGCTCC
TTTGATGGGAGGAACTCCCTATTGCGGATGTGGTCCCTGTGGAGGTTGCT
GTAGTCCTTGCTGTGGTCCATGTGGTCCTTGTGGTGGCTGCAGCTCGTGT
CCTTGCGGCTGGGCAAGCTTTCTAGACCAT

FMO04391.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31740-RA 606 CG31740-RA 220..402 30..212 915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18009308..18009490 30..212 915 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:20:39 has no hits.

FMO04391.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:23 Download gff for FMO04391.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31740-RA 215..408 25..218 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:39 Download gff for FMO04391.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31740-RA 240..433 25..218 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:59 Download gff for FMO04391.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31740-RA 215..408 25..218 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:59 Download gff for FMO04391.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18009308..18009496 30..218 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:23 Download gff for FMO04391.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18009308..18009496 30..218 98   Plus