FMO04394.5prime Sequence
520 bp (520 high quality bases) assembled on 2008-07-30
> FMO04394.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGATTCCCACTAATC
TGGGCAGACAGAATGGGGCTCTGGTGTTGGAAGTGTTGAAGGTGCTGGGT
CGCCCGGCGACCAGTTACGAGGTGGCGGAAAGAGTGGCCGACGTCTACAG
GCTGCCGCTGCACCGCATCCGTCCCGTGGTCACCGACGTCCTGGAGGCAG
GATCACGACATGGATTCTTTAGCAGCCTCAATGGCCATTATTCGGTGGTG
CAGCCGGTGGTGGAGCAACTGGGACGGGATATAGACCAGTATGCAGCCGA
TATACTGGCGGGATATAGTTGCGAGGGTTCTCTGCCCAAGATGTCGACCC
TGATGCTCAAGCTACAGCAACTGGACGGGTCTCCGCCCATGATGACGGGG
ATCAGGTATCCCCGAGTGAGCTCGGGGGAGCAACGCGAACACATGCCCTC
CGGCGATGTGTCCTTGGACGCCCGTCTCATGCTGCCCTTTCCTCGAGTAC
TAGCAAGCTTTCTAGACCAT
FMO04394.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31407-RB | 778 | CG31407-RB | 196..663 | 35..502 | 2325 | 99.8 | Plus |
CG31407-RA | 764 | CG31407-RA | 182..649 | 35..502 | 2325 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10022960..10023427 | 502..35 | 2325 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:33 has no hits.
FMO04394.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:31 Download gff for
FMO04394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31407-RA | 180..657 | 32..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:41:59 Download gff for
FMO04394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31407-RA | 180..657 | 32..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:41 Download gff for
FMO04394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31407-RA | 180..657 | 32..510 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:41 Download gff for
FMO04394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10022952..10023429 | 32..510 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:31 Download gff for
FMO04394.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5848674..5849151 | 32..510 | 98 | | Minus |