Clone FMO04401 Report

Search the DGRC for FMO04401

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:44
Well:1
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33340-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04401.5prime Sequence

692 bp (692 high quality bases) assembled on 2008-07-30

> FMO04401.5prime
TAATCCCTCCCGAGTACTGTTCCGTCCAATTTTTGGTGCGGTTAACAGCT
GTGTGCGATTTGCTTCCGGTTGTGAAAAGAAGGGGCCGAGCCGGTGCCCG
AAGGTGTTGACCAAGTTCCCCTGCGGCAAACCCAATCTGCAGGCTCCGCC
CAAGAAGAAGAGGAAGATGGTCAAGGCACAGTCCATGTGGCTGAACCCAT
TCTGTGATCCCGACGACACCGCCTGTCCGTTCAATCCGCGCTTCGACGAT
ATCTACTACGTCGAGTCGGACAAGGCCAAGCGGAAGTACTGGCAGACATG
GGTGGCCTGCCCTCCCATCCAGATTAAGCCCAAGAAGATTTGCTGTTTCG
CCAAGGCTAAGCCGGCTCCTATCAAGCGGCGAAAGCCATCGGCGAAGCCA
TCGACCGCCTGCCCGCAGCCTTGTCCGGATCCGTCGGAGGATCTGTGTCC
CCGTCTGGCCCGTCGCTGCCATCGCGATGGTCGCCGACCACCCTCATGCA
GAAGGGAACGAGGACCCCTGCCGTGTGTGAAGCCCCGGACGCCATATCCA
TCTTTCTCCGAGTGCCGACGTCTCAAGCCCGATGCCCCGCCACTGAAGGA
GTGCAATTGTCTGGCGAAACCGCTGCTCTGTGAGATTTGGGCCGAGTTCC
GACGACGAGCCATTGCCAAGAAGGCAAGCTTTTCTAGACCAT

FMO04401.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG33340-RA 1152 CG33340-RA 151..823 1..673 3350 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24363288..24363960 1..673 3350 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 21:34:15 has no hits.

FMO04401.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:38 Download gff for FMO04401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33340-RA 151..829 1..679 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:44 Download gff for FMO04401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33340-RA 142..820 1..679 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:47 Download gff for FMO04401.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33340-RA 151..829 1..679 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:47 Download gff for FMO04401.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24363288..24363966 1..679 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:38 Download gff for FMO04401.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20189010..20189688 1..679 99   Plus