FMO04403.5prime Sequence
842 bp (842 high quality bases) assembled on 2008-07-30
> FMO04403.5prime
ATAGCATACATAAAACGAAGTTATCAGTCGACATGGAGAACAGGAGGTGC
ACCGTCGTTGCCGTGGGTGACCTTGTGGATGAGCTTGGCTTCTGTTGCGA
GTGGTGTGGCAAGGTGTACAAGAGTCTTGTCCGCTACCACAACCACATTG
TATGCACCCACAAGTTACCTGTTCCGGATCACCAGTTGGTCAACTGCTTC
CACTGTCCACGCAGCGATTGCAGATTCCACAAGCATGGACCCGGAGTACA
GAATTTTCGGCAAATTGGAAGGCTCCGCCGCCACTACCAGGAGAAGCACA
TGACAGGACACCTTACGTGCGAGTACTGCCAGAAGCAGTTTCAACTGAAG
TCAGCGCTGGTGGCCCACAGATGTCGGCTGAGGCATCCAGCCATCAGGGA
TAGTCAGTCCGCCATCACTTTGGGGAGGCATGTGTGCAAAAAAGGCTACA
CGCATCTGGGCGCCCTACAACGGCGCCTCACCTGCTGCCAGCATGGAACA
CCAAATACTCCGACGGAGGACCAGAAGGATATAAGGGACACGGTGTGTCT
GCAATGCAACAAGGAATATGTTGACACCCATCGCTGTTGTGTACGAACCG
AGCGAAGCTTTCAGTCTGACCGTCTCATCTTCAGAAAGTCTAGTCAGGAG
ACCCACGGTAAATCCAGGTACCTGCAGGCGGAAGACTGGCGCTTTCTGTT
TGAAATGGAGCAGCTTGTCCGCGGCATTGACGACGGGCTTGTGCGGGACC
CTTTGTTGCTCACGGAACTCGCCTCTCTGGTGCCGGTGCTTCAGCAAATC
CAGGATTCTGATTTAGAAATAAAGGCAAGCTTTCTAGACCAT
FMO04403.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 862 | CG14451-RA | 51..842 | 33..824 | 3960 | 100 | Plus |
| mael-RD | 2143 | CG11254-RD | 48..273 | 824..599 | 1130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22721250..22722041 | 824..33 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:01:06 has no hits.
FMO04403.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:58 Download gff for
FMO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 27..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:07 Download gff for
FMO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 1..795 | 33..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:50 Download gff for
FMO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 27..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:50 Download gff for
FMO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22721250..22722050 | 22..824 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:58 Download gff for
FMO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22714350..22715150 | 22..824 | 99 | <- | Minus |
