FMO04414.5prime Sequence
402 bp (402 high quality bases) assembled on 2008-07-30
> FMO04414.5prime
TTCTTCATCGTCAGCTCCCTGGTCCTCTGGTACCTCCTGCTTTTCGGTGG
CAGGGGCGTCAGAGGCGTGGAGGCCACCAACGGGCACGGGGGTCAGCTGG
AGGGACGGGACTTTCATCACCATGGCGGCAGTCACCACATTCGCCGTAAC
ATTAACCATTGCTGGCGCCGTTACGATGGCTACAATCTGCAGAACACTGT
GGTCAACAAAAAGGAGCAGCTGAAGAAGCCCTATGGCATATTGTGCAACT
TCAAGTGCACCTGGTTCTTCACCGTCAGCTTCCCCACTTGCGAGTTCATC
TACGATTATAAGTTATCCTGCGTGCTGTTCACTTCACTGCCCGACTGTAC
CAGCGTCCAGTGTACGCTTATGAATTACTTCGATGCAAGCTTTCTAGACC
AT
FMO04414.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1537-RA | 869 | CG1537-RA | 351..733 | 2..384 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11062673..11062820 | 149..2 | 740 | 100 | Minus |
| X | 23542271 | X | 11062331..11062463 | 278..146 | 665 | 100 | Minus |
| X | 23542271 | X | 11062163..11062271 | 384..276 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:14:59 has no hits.
FMO04414.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:20 Download gff for
FMO04414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1537-RA | 350..738 | 1..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:47 Download gff for
FMO04414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1537-RA | 265..653 | 1..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:29 Download gff for
FMO04414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1537-RA | 350..738 | 1..391 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:29 Download gff for
FMO04414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11062158..11062268 | 279..391 | 97 | <- | Minus |
| X | 11062331..11062463 | 146..278 | 100 | <- | Minus |
| X | 11062677..11062820 | 1..145 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:20 Download gff for
FMO04414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10956191..10956301 | 279..391 | 97 | <- | Minus |
| arm_X | 10956364..10956496 | 146..278 | 100 | <- | Minus |
| arm_X | 10956710..10956853 | 1..145 | 99 | | Minus |
