FMO04415.5prime Sequence
378 bp (378 high quality bases) assembled on 2008-07-30
> FMO04415.5prime
ACGAAGTTATCAGTCGACATGGATTGGATCAAAATATTTGTTTCAGGTCT
TGCCCTGCTATTGATTGGGATGGCGCAGTGCTACCCGCAGTTCGATAGCG
AAAACCCCTGGTTGAGGCCTCGGCAACCCACTGAACCTACGATATCTCCG
AATGCGGGGGGCAGTACCCCGGCCAACGCTGCTCCACCAACCACCCAGTC
ACCGCGCTATTTCGCCTGTTTCCATTCATGCCCGGCCACCAGCGAGTACA
ATCCAATCTGCGGCAGTGATAACGTGAACTACTACAATGAAAACAAGTTC
AACTGCGCCTTGAACTGCGGCCTAAACATCCGGAAGGTGCACAAGGGAAT
TTGTCAGACTGCAAGCTTTCTAGACCAT
FMO04415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kaz1-ORFB-RF | 1130 | CG1220-RF | 616..961 | 15..360 | 1715 | 99.7 | Plus |
| Kaz1-ORFB-RE | 1143 | CG1220-RE | 629..974 | 15..360 | 1715 | 99.7 | Plus |
| Kaz1-ORFB-RA | 562 | CG1220-RA | 48..393 | 15..360 | 1715 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 217490..217775 | 40..325 | 1430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:04 has no hits.
FMO04415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:14 Download gff for
FMO04415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kaz1-ORFB-RA | 45..393 | 10..360 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:12 Download gff for
FMO04415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kaz1-ORFB-RF | 613..961 | 10..360 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:24 Download gff for
FMO04415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kaz1-ORFB-RA | 45..393 | 10..360 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:24 Download gff for
FMO04415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 217491..217775 | 41..325 | 100 | -> | Plus |
| 3L | 217855..217889 | 326..360 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:14 Download gff for
FMO04415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 217491..217775 | 41..325 | 100 | -> | Plus |
| arm_3L | 217855..217889 | 326..360 | 100 | | Plus |
