FMO04418.5prime Sequence
986 bp (984 high quality bases) assembled on 2008-07-30
> FMO04418.5prime
GAAGTTATCAGTCGACATGTCCCAGACCCTGGACGATCTGCTGTTGCGCC
AGGAGCACGCCCGGCAATTGCGCCAGGCCACGCGCTCCAAGTTCCGGCGC
ATCAATTCGCTGGATCTAATACCGGAGCATCCCAGCCAATCGGAGGAGGA
GGAGGACAAGGAATCCCAGACGGCCCACAAGCACTTTGTCACCCTGAGAC
GACAGCGGACGGCTGATGGCAATCTGCTGAGGCATCAGTTTCAGACGCAG
TCGCCGCCACAACCCAATTTAGGCACACGGGTCCTGCTCTTCGGACCACA
ACTGCTGATGCGTCTGGTGCTGACCATCTTGAGATACGTCCTCTACATAC
CACTGTCCATTGCGGCGCCAAGCTTTTGGTTGTCCGCCCTGCTCTGGATC
TTTTGGAAACTGCTGCGGGTACCCATTGCGTTGGTCAAGTGGCTACTGAG
CGGCGAGGAGGAGCTGGGTGCAGTGCAGCGACAGAAGACCATACTCCTCA
GCTGCGGCAGCACCATACAGACCCTACATTTGGCCAGGAACTTCTACGGA
TCCGGCGCCCGTGTGGTGGTCTTTGAGTTCGAGGGTTTGTTCGGATTGGC
CAGATTTTCCACAGCGGTGGACAAATTCTATGTGGTGCCACGGCCAACGG
CCAGTAATCCGGATCAGTACATAGCCGCCCTGTGCCACATCGTGAAGAAG
GAACGACCCTCGGTCTATATACCCGTTTGTGCCACCAGTCCGGCATACTA
TGATTCCCTGGCCCGACCACATCTGGAGGTCCTGGGCTGTGCCAGTTTCA
TACCCGGCGTGCAGGAGACACTGCAGCTGGATGACTGCCTCCAGCTCTTT
CAGAGATGCGAACAGCAACAGATGGCTCTGCCAGCCCATGTTGTGCTGAC
AGCCTCCACGGCAATTGCAGCAGATCTACGAGAGCGGTTTCGTGGGCAGC
TATAGGAACATTACTCATGGCCGCAGGGATGCAGGA
FMO04418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-RC | 2210 | CG13607-RC | 177..1143 | 17..985 | 4780 | 99.7 | Plus |
| CG13607-RA | 2129 | CG13607-RA | 96..1062 | 17..985 | 4780 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24115110..24116076 | 985..17 | 4730 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:33 has no hits.
FMO04418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:11 Download gff for
FMO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 89..1062 | 10..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:38 Download gff for
FMO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 63..1036 | 10..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:25 Download gff for
FMO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 89..1062 | 10..985 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:25 Download gff for
FMO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24115110..24116083 | 10..985 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:11 Download gff for
FMO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19940832..19941805 | 10..985 | 99 | | Minus |
