FMO04424.5prime Sequence
812 bp (806 high quality bases) assembled on 2008-07-30
> FMO04424.5prime
CTTATACGAAGTTATCAGTCGACATGGTGCAGTCGGGGATTTGGCGTTCG
AAACCAATTCTCTGGCGGATAAGATTTTGCGCGGCGATATATTTTATTAT
TATTAGAGCGCTGTGCAACACTGTCACAAAGCCGATAGCTTCGATAACGG
CCGATAAACAGTTACGTAGCATCTCCACTTCGAACACCATGTCTTTCCGC
CCATTGGTCGAGGGCGACTGCGGTGGAGTTAATCCTCTCATGCAACTGGG
CGGACAGTTCACCCGCGATGTTGCCCACAAGGATGAGGGCTATGTGCAGC
GACACTTCGAGCGCGCTGCTCGTCCCGAGGACCAGTTGATCAACGAGTTC
CTGGGACAGGTCACTGCCCCACCGCAGTCATTTCAGATGGACACTCTGCT
CCAGGAGATGCGGGACATAAATATTCACGGAAATCCGCAGCAGCAGATGC
ACTCTCAGCAGGCGGAGCAGTGGGGACAGGACTTTGCCCGCGGACTGGCA
CCCGCCCTGCCCAACAAGATGATCCACATGCAGGCACAGCAGCAGGACCT
GCAGCATGCCCAGGAGTTCTTCGACGAAACCCTGATCAATACCCAAAACT
TTCGGTCCCTGCCGCCATTGCGTCAGCCTTTGATGCCCATTGCGGCAGGA
CAGCAACAGGACCCCTTCTTTGACTCCGCCATGGAAACTATAATCACAGA
TCATCTGCCACAGCGCCACAGGGGAATCGCTGGACGACTGGATCAGCGAC
TACAGCGCAGCACCGAACAAAGAGCAAACCGCCGCTACTTCAACGAAAAG
TTCTGGGAGCGG
FMO04424.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-RA | 2158 | CG14815-RA | 137..932 | 23..812 | 3750 | 98.5 | Plus |
| Pex5-RB | 1972 | CG14815-RB | 87..746 | 159..812 | 3070 | 98.2 | Plus |
| CG14803-RB | 3404 | CG14803-RB | 1..56 | 78..23 | 280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1868058..1868717 | 812..159 | 2945 | 98.2 | Minus |
| X | 23542271 | X | 1868787..1868925 | 161..23 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:35:03 has no hits.
FMO04424.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:04 Download gff for
FMO04424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 128..932 | 11..812 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:37 Download gff for
FMO04424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-RA | 128..932 | 11..812 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:06 Download gff for
FMO04424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 128..932 | 11..812 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:06 Download gff for
FMO04424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1868058..1868714 | 162..812 | 98 | <- | Minus |
| X | 1868787..1868934 | 11..161 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:04 Download gff for
FMO04424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1762091..1762747 | 162..812 | 98 | <- | Minus |
| arm_X | 1762820..1762967 | 11..161 | 96 | | Minus |
