FMO04425.5prime Sequence
1245 bp (973 high quality bases) assembled on 2008-07-30
> FMO04425.5prime
CATTATACGAAGTTATCAGTCGACATGGAAGTGACCTTCAAGAAGGCCCG
ACTGGGAAAGGAGAGACTGGTGGAACAATCGGAGGAGGAGGAACGCGATG
AGGGCTCCTCTGGCCAAGATTTGTTTGGGTGGTGGGCCCTGCCGGAGCCA
GCGCTCTTGATGATCTTTGAGCGCCTGAGTGTGCCCGATCTGCTGAGGGC
GAGTCGCTGCTGTGTGCGGTGGCACAGCATCGCCAAGGACGACTTATTGT
GGCGCCACAAGTTCCAGGAGCACTTCAAAGCCTCTCCGAGCATTCCGCTC
AAGCCGGGGTCCGAAAGCTGGCGAGCGGAGTACAAGCGCCTGTCCATGCA
CATACCCTTTGTCCAGGCACAGCGACTGGAGCCCACTGTGGAGAACAACC
ACGGCCACACGCACCAAGTGCTGCATGTAAGCTTTGCCCACAACGGGGAA
ATGTTTGCCACCTGCTCCAAGGACGGATATGTGATAATCTGGAACGCCCA
GCATCCGTGTTCGGAGAAGTATGCGCACAACATGAAGCAGTTCAGCTGGA
AGTACTCCCAATACTCGCAGTTCAATCAAAGCGACACCTTGCTTCTCGTC
TCCGGTGTTCACTTTGGTTCGCCCCAATCCACTTCCGGGGAGATTGCTGT
ATTCTATTTGGGAGCAACAGAGTCACACCTACGCTGCCGGGTGGTAAATC
GTCCGTATGACATCTTTGGCACCTGGTTCAGTGACCAATATCTGATCTCA
GGCGACCTGCACTGGCTGGCGCACTTGGTGAGCACCTCGGTTCTGTGGCT
GAACAAGGCCAACCAAGAAATTGACTCGGAGCATGTGCCGATCATGAGCC
AAGCTATATAAGTTTTACAAACCGAAATGCTAGTTCGGTTCGAAGCTTAT
AATGGTGGCCAGGTGTTCCATGGGCTGGACGAGAAGTAACGATCCCCTGG
CCACTTACTGCCGACCAAGAAAGTCACAGCTCCGTGCTCTCGCCACCCAC
TGGAAGATCAGGAATCTTACCTCCGCAGGCCAATTGCAATCCAGTGTCCC
ACGCCTGCCCAGCATACTACGCACCAAGAGCTCAACACCCGAGAATACTA
CTTGCTGAACTCAGTGGAGCGCCGGTTCTAGAGCGAGACTCGGGGCCATG
TCCCACATTCACTACTTTGAATGAATACGTACGCACATGCCCCACCCATT
ATGGATCTCACCCATGCACCAGCAGACAGAAGGGAGTTCTACGAC
FMO04425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 188..1325 | 24..1178 | 5060 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6065304..6065766 | 486..24 | 2315 | 100 | Minus |
| 2L | 23513712 | 2L | 6064607..6065250 | 1143..487 | 2310 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:18 has no hits.
FMO04425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:53 Download gff for
FMO04425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..1334 | 20..1185 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:52 Download gff for
FMO04425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 180..1330 | 20..1185 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:18 Download gff for
FMO04425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..1334 | 20..1185 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:18 Download gff for
FMO04425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6064607..6065250 | 487..1143 | 96 | <- | Minus |
| 2L | 6065304..6065770 | 20..486 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:53 Download gff for
FMO04425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6064607..6065250 | 487..1143 | 96 | <- | Minus |
| arm_2L | 6065304..6065770 | 20..486 | 99 | | Minus |
