FMO04426.5prime Sequence
933 bp (933 high quality bases) assembled on 2008-07-30
> FMO04426.5prime
TAGCATACATTAAACGAAGTTATCAGTCGACATGGTCCACCTAAATGAGA
AAGCGGAGGATCAGCTGATGACCACAAGGATTTCGGATTTGCAGGATTGG
CTGCAGGCGCAGCCACAGTTGCCGCAAAATATATCCCGATTGCTTCTGCG
CCGCTTTCTGCACACGACGCGGGGTGATCTATCCGCCGCCCAGCGACTCT
TGGAACTGAATTACGGACTGCGTAACAAACATGCACACATCTTCATCGAT
CGCGATCCGTTGGATGCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCT
GGTGCCGTTGCCCGGCTTGACCCCGGAGAACAACAAGCTGCTCTTTTACC
GCCTCATCGACTTCGATGCGGACAAGTTCAACTTTACGGCTGCCATCAAG
GTCTTTTTCATGGTGGCCGACTGTCGATTTGCGACGGAGAACGAGGAGCG
TTTGTCGGACGGCGAGATACCAGTTTTCGACATGGCTGGCTATACGCTGC
GCCACCTGACCAAAACCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTC
GTCCAGGAGGCACATCCCGTACGGCTCAAGGAGATCCACGTGCTCAACTG
CCCGTCGTATGTGGACAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGG
GAGAGGTGTTCAAGCTAATCCATTTCCATTTGCCAAATGCGGACACTCCA
TATCGGCACTTCCCGCGATCCATGTTGCCGGAGGAATACGGCGGGGAGGC
GGGCAAGATGTCCGACCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGC
AGAGGGATTATCTGATGGATACGGAAAACTGGCAAATAAACAAAATCAAA
AAGAATGGCCAACGAAAGTCAAGTGATTCCGGAGTCACAGAAGGTCTACG
TTCCCTCGAAATTGATGCAGCTTTCTAGACCAT
FMO04426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3823-RA | 1282 | CG3823-RA | 142..1031 | 27..916 | 4435 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6305864..6306294 | 375..805 | 2155 | 100 | Plus |
| X | 23542271 | X | 6304717..6304876 | 135..294 | 800 | 100 | Plus |
| X | 23542271 | X | 6306381..6306494 | 803..916 | 570 | 100 | Plus |
| X | 23542271 | X | 6304116..6304223 | 27..134 | 525 | 99.1 | Plus |
| X | 23542271 | X | 6305684..6305765 | 295..376 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:10 has no hits.
FMO04426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:15 Download gff for
FMO04426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3823-RA | 142..1034 | 27..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:53 Download gff for
FMO04426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3823-RA | 127..1019 | 27..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:21 Download gff for
FMO04426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3823-RA | 142..1034 | 27..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:21 Download gff for
FMO04426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6304112..6304223 | 19..134 | 94 | -> | Plus |
| X | 6304717..6304876 | 135..294 | 100 | -> | Plus |
| X | 6305684..6305765 | 295..376 | 100 | -> | Plus |
| X | 6305866..6306293 | 377..804 | 100 | -> | Plus |
| X | 6306383..6306497 | 805..920 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:15 Download gff for
FMO04426.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6198145..6198256 | 19..134 | 94 | -> | Plus |
| arm_X | 6198750..6198909 | 135..294 | 100 | -> | Plus |
| arm_X | 6199717..6199798 | 295..376 | 100 | -> | Plus |
| arm_X | 6199899..6200326 | 377..804 | 100 | -> | Plus |
| arm_X | 6200416..6200530 | 805..920 | 98 | | Plus |
