FMO04427.5prime Sequence
619 bp (619 high quality bases) assembled on 2008-07-30
> FMO04427.5prime
TTATCAGTCGACATGGCGAGCAAAGTCTCGATCCTTCTCCTGCTAACCGT
CCATCTTCTGGCTGCTCAGACCTTCGCCCAGGAGCTCATCTCTTGGCAAC
GGCAACAACAACAGCAGCAACAGCAGCAACTGCAGCTACAGCAGCAACTG
CTGCTGCAGCAGCAACAACACCAACGTAACCCAAGACCGGAGCTGGGCCT
CCGTTCCCTGCCCGGAAACCCGTGGACCCAGAACAATCAGGAAGCCATAA
GCGATGTGGTGGCGGTGGACCTAACCAAACGTGAGCCGGTCACTCCGCCA
CCCAATCGCCCGCCGCCCGTCTTCAGCTACATGGACCGCTTCAGCTCCGA
GCTCTTCAAGGAGATCATTAAGTCGCAAAGTCAGCAGAACGTGGTGTTCT
CGCCCTTCTCCGTCCACGCGCTGCTGGCCCTGATCTACGGGGCCTCGGAC
GGAAAAACGTTCCGGGAACTGCAGAAGGCCGGAGAGTTCAGCAAGAACGC
CATGGCCGTGGCCCAGGACTTCGAGAGCGTGATCAAGTACAAGAAGCATT
TGGAGGGCGCAGATCTGACCCTGGCAACCAAGGTCTACTACAACCGCGAG
CTGGGTGGCGTCAACCACA
FMO04427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nec-RA | 1633 | CG1857-RA | 93..701 | 11..619 | 3030 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7157475..7158065 | 619..29 | 2940 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:58 has no hits.
FMO04427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:18 Download gff for
FMO04427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nec-RA | 86..700 | 3..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:39 Download gff for
FMO04427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nec-RA | 73..687 | 3..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:21 Download gff for
FMO04427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nec-RA | 86..700 | 3..618 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:21 Download gff for
FMO04427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7157476..7158065 | 29..618 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:18 Download gff for
FMO04427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3044981..3045570 | 29..618 | 99 | <- | Minus |