FMO04430.5prime Sequence
465 bp (465 high quality bases) assembled on 2008-07-30
> FMO04430.5prime
AAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCCT
GTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGTC
TCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAAG
CCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGGC
GACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAGG
GACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAAG
AAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAGC
GTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCAT
GCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGGCA
AGCTTTCTAGACCAT
FMO04430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst35Bb-RA | 679 | CG4478-RA | 142..573 | 16..447 | 2160 | 100 | Plus |
| Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 16..444 | 1890 | 96 | Plus |
| Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 16..444 | 1890 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14882306..14882687 | 397..16 | 1910 | 100 | Minus |
| 2L | 23513712 | 2L | 14879237..14879618 | 397..16 | 1655 | 95.5 | Minus |
| 2L | 23513712 | 2L | 14882207..14882258 | 447..396 | 260 | 100 | Minus |
| 2L | 23513712 | 2L | 14879141..14879189 | 444..396 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:58:53 has no hits.
FMO04430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:31 Download gff for
FMO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst35Bb-RA | 136..576 | 11..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:17 Download gff for
FMO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst35Bb-RA | 130..570 | 11..451 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:17 Download gff for
FMO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst35Bb-RA | 136..576 | 11..451 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:17 Download gff for
FMO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14882204..14882257 | 397..451 | 96 | <- | Minus |
| 2L | 14882307..14882693 | 11..396 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:31 Download gff for
FMO04430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14882204..14882257 | 397..451 | 96 | <- | Minus |
| arm_2L | 14882307..14882693 | 11..396 | 99 | | Minus |
