FMO04433.5prime Sequence
388 bp (388 high quality bases) assembled on 2008-07-30
> FMO04433.5prime
TACGAAGTTATCAGTCGACATGAGAACCTTGACGGCATTTGCGATTATCG
CTTTTTTTGCACTGGCTCTAACGGAGGCGGCTGTTTACATCGGTGGCGGT
TGCTACGACTGTAATCCACCCGGAGGCCAAGGACCTGGAGTCTACACAGG
TGGCAACGGAGGACGAGGAGGAGGAGGTGGATACAACGCAGGCGGAGGCG
GTGGAGGATACTACAACGGCGGCGGAGGTGGAGGAGGTGGCCGTCGTCCA
GTATATTCGGGCAACTTTGGACCCGGCTATGGTAACGGCGGGGGAGGAGG
TGGAGGAGGCTACGGAGGCGGCGGTGGAGGTGGCTACGATGATGGCGGTC
TTACGCAGATTATAAGCGGCGCAAGCTTTCTAGACCAT
FMO04433.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5778-RC | 503 | CG5778-RC | 75..425 | 20..370 | 1740 | 99.7 | Plus |
CG5778-RA | 657 | CG5778-RA | 75..425 | 20..370 | 1740 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22085606..22085865 | 370..111 | 1285 | 99.6 | Minus |
3R | 32079331 | 3R | 22086229..22086323 | 114..20 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:03:16 has no hits.
FMO04433.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:20 Download gff for
FMO04433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5778-RA | 67..432 | 12..378 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:59 Download gff for
FMO04433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5778-RA | 67..432 | 12..378 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:25 Download gff for
FMO04433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5778-RA | 67..432 | 12..378 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:25 Download gff for
FMO04433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22086233..22086331 | 12..110 | 97 | | Minus |
3R | 22085599..22085865 | 111..378 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:20 Download gff for
FMO04433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17911955..17912053 | 12..110 | 97 | | Minus |
arm_3R | 17911321..17911587 | 111..378 | 98 | <- | Minus |