FMO04434.5prime Sequence
1203 bp (1027 high quality bases) assembled on 2008-07-30
> FMO04434.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGTCGGACCCGTG
TTGGACGACAGTATTTTTATGGCTGCTCTGGCTGCCACACCTCCAGCAAA
ATGCTTTGGTTTCTGGCGAGGATCTACCACCGCCGTTCCAGCGGATCTAC
CAATCGGAACAGACGGTACGACGTTCAAAGGCTCAGGATATGGGCAGTCA
TGTGAACAAAAGCATCGATCCCTGTGTGGATTTCTATGCATATGCATGCG
GCAATTGGAAGTCAACTCTAACCCCACAGCAGCAATTGCAGCAGCAAACA
GACCGGGAGCTTCTTCTGCTCGTGGAGGAGGCTGTAAGGAGAGAGGATAG
CGTCATAGTTCGACAGGCCAAGGAGCTATTCAAGTCCTGCGTATCGGCAC
AGGCTCATCAGAGCCAGCAGCAGCAGCATTTCCTCAGCGAGTTCATCAAC
CAGAACGGAGGCTTTCCAGCTGTTCCCGGTTCCCAATGGGCAGTGCATCA
CCATGACTACAATTGGCTTAGTGTGTTAGGTGGTCTAAGACTTCGCTATG
GAATGGACATCCTGATCGGACTCCGAGTGGGCTATAACTATGGCAATGTA
AATGAGAACAGCTTGTATTTAAGTGAACCGAGCACATTGATTCCAACCGA
GTTGTGCACTCGGAATCGCTCAGATATTCGGGACTCCATTTACGAACCCC
TTGAACATCGAGTGGCATCCGAACTAAAATCTTGGTTGGCATTGGGACAC
GATGAATCCGCTCGTCTAGCTGCCGACATTCTTAGTTTCGAGCATGAGTT
ATGTGGTGGAATGAAAGGTGGATCCTTTGAATCCTGGGATGCCGAGGACA
GCTCTATCTAGCCAACTACACCCGCAAAACGTTGCGTGAGTTCTCGAATT
CGATCGACTGGATTTGGATTCATATGTAAGGCAGTTTTGGCCAGGATATT
TATAACCCGTTTACATGGCAGCACCGGAATATTTTCGCCACTTAAGCGCA
CTGGTGAGTGCCCACACATAGTCTAGTGACTAACTATATAATGTTATCGA
GGCGGTGTCTGCTCTGACTTTTCCTCTAGAATGAATCGCCGCAGTTAAGG
AACGGGAAGGCTTGGAACGACCTTAGACTACTCCCGGCATGGGTGATATG
CGCATGGAACCTGGAAATGCGATTATTTGGCATCACTTTTGAATACCTAT
ACG
FMO04434.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4723-RA | 2272 | CG4723-RA | 20..1109 | 36..1120 | 5040 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22762603..22763692 | 1120..36 | 4720 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:28 has no hits.
FMO04434.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:17 Download gff for
FMO04434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 12..1112 | 28..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:14 Download gff for
FMO04434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 12..1112 | 28..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:59 Download gff for
FMO04434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4723-RA | 12..1112 | 28..1123 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:59 Download gff for
FMO04434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22762600..22763700 | 28..1123 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:17 Download gff for
FMO04434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18588322..18589422 | 28..1123 | 97 | | Minus |
