FMO04448.5prime Sequence
1226 bp (1015 high quality bases) assembled on 2008-07-30
> FMO04448.5prime
TAATACGAAGTTATCAGTCGACATGCAGCAGCTACGAAATGCCGTGGTGC
ACGGTTGGGCTAGAAGGATAAGGGCCCCATCGAGAAGTGCCCACAGTGCC
GGTGCCGATATCTACGACGTGGTGGTCATCGGAGGCGGACATGCCGGAAC
AGAGGCCTCGGCGGCAGCTGCTCGCATGGGATCACGCACCCTGCTGCTAA
CCCACAAACTGGAGACTATTGGCGAGATGTCCTGCAACCCGTCGTTCGGT
GGCATTGGCAAGGGTCACCTGATGCGCGAGGTGGATGCCCTGGATGGCGT
ATGTGCCCGCTGCTGCGATGTTTCCGGAGTACACTACAAGGTGCTCAATA
GACGGCGCGGTCCAGCTGTTTGGGGGCCCAGGGCGCAGATCGATCGCCAG
CTGTACAAAAAGGCTGTGCAGCAGGAACTGCACAGCACCCCCAATCTGGA
GATTCGAGCAGCCGCTGTGGACAACCTGCTGATAGAGGATGAACAGGATA
CCCAAGCCCGCCGTTGTACCGGCGTCCTTTTGGCCAACGGAGAAGTGGTA
CGTAGTCGATCCGTGGTACTCACCACGGGAACATTCCTGCGGGCACACAT
AAACATCGGACTCGAGGTGCGACCGGCCGGCCGAATTGGAGACGCTCCAG
CCAAAGCGCTGGGCGAGGCGATCGACAGATTAGGTTTTCGCATGGGGAGG
CTGAAAACTGGAACTCCGCCTAGAATAGCAAAGGACAGTGTGGATTTCTC
ACAGCTCCAAAGGCACGAAAGTGATGATCCGCCTATGCCTTTCTCCTTTC
TCAACAAAGACGTTTGGCTACCCGCCAAGGACCAACTACCCTGCTACCTT
ACCTACACCACACCAAAAGTCAGCGACATTGTGCGCGACAATCTTCATGT
AAATCGCCATGTCACCGAGGAGATTACCGGGCCCACGCTACTGCCCTCGA
TTGAGTCCAAGATCCTGAAGTTCGGCGCGAAGTACATCAGGTGTGGTTAA
GAGCCAGAAGTCTGACAGTTCTTAATGTATTCCCAAGGAATTCTCCTGCA
CGCTGCCCCACGATAAGCAAGTAAAAGCTGTCAATGCATTCCAAGACTGA
AAAGGCGTTAGTGTTCAAGCCCGTTATGGCGTGAATCGACCTCCATAGAA
CCCCGTGAGATGATCCCAACTGAACAAACGAGGTCAGACTCTTCTTTGCT
GCCAAATAAATGTAAAACTACTGCGC
FMO04448.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4610-RA | 2099 | CG4610-RA | 44..1247 | 23..1212 | 5145 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22492240..22493292 | 23..1073 | 4805 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:59:10 has no hits.
FMO04448.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:00 Download gff for
FMO04448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 44..1096 | 23..1073 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:00 Download gff for
FMO04448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 27..1079 | 23..1073 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:53 Download gff for
FMO04448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4610-RA | 44..1096 | 23..1073 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:53 Download gff for
FMO04448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22492240..22493292 | 23..1073 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:00 Download gff for
FMO04448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18379745..18380797 | 23..1073 | 98 | == | Plus |
