FMO04450.5prime Sequence
1185 bp (1027 high quality bases) assembled on 2008-07-30
> FMO04450.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGACTTCGATCGAGTCA
AAACGCGTCCAATATCGAAAGTATTTGGAACGCGCCGGAGTCATCGATGC
CTTAAGCAAGGCTCTGATTAAGCTTTACGAAGAGCAGAATAAGCCGGAGG
ATGCCATTCGCTTTGTACGCAAGTTTATGTGCGAGAGCTGCCCGGACGAT
GCCCAGTACGATGTAATGAAGAACGACCTCGAGGAGGCCAAGACCCACAT
CTCGAAACTGGAGCAGGAGCTTGAACGGCTACGCGGACAAATCAAAAAGT
CACCGGAGGAGTACCAGGAGCTCACTACTGAGGGCTACAAATCGCTCATG
GATGATGAGGAGAACGTGAGCTCACTGCTGCGCAAATACCTGACTCCGGA
ATTGCTGGAGGAGTACATGCTGGTCACCACACCTGCGCCGGTGGATGCCT
ACCTATACGATTGCGCCGTCTCCGGATTCGAGCACCACGACGCGCCCGTG
GGCATTTTCGCGGCAGATGCTGACAGCTATGACGTGTTCAACAAACTCTT
TGATCCGATCATAAAGGACTATCATGGCCAGATGGACAACGAGAACGATG
TGCTGCAGAAAGACCCAGACTTTGGCAACGTGGACGAGATCGAGAACTTG
GATCCGGAGCGCAAGTACATTCTGTCCGCACGAATCAGATTGGCTCGCAA
TATCGAAGGTCTGCCCTTCTTCCCCAAACTGACCGAGAAGCAATTCATAG
AGGTGGAGGAGAAGGTGCGTTCGGCCACGGAGACAATGGATGGCGAGCTG
ATTGGCTCCTATCTGACAATGGCGGACATCGATGCTGAGACCCAGGCGGA
GATGGTCAAGAGACATATATTATTCCAGCGCGGCGATGAGAAGCTGACCA
CAGCCGGCTGCTATCGTTTCTGGCCAACTGGTCGTGGTGTCTACCACAAT
CCCGCCGAGACCTTCTTGATCTGGGTGAATCGCCAGGACCATGTGCACAT
TATGTCCATGGCACAGTGCGCGACTTGGGCGATGTTTACATCGCCTTGTC
ACGTCTACGACTGAAAGACGTGCTTGCCGCATCCGCGTTATGAAACTACG
CTGCCCCACATGGGACACACTGCGGCTTCAGGTCATCGCTGCGTCTGCAG
GACCGAATGTTCAATCGCCTCTGCGGAGAAAGAAC
FMO04450.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-RA | 1773 | CG4546-RA | 247..1267 | 33..1051 | 5055 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15847170..15847930 | 293..1051 | 3705 | 99.7 | Plus |
| 3R | 32079331 | 3R | 15846854..15847105 | 41..292 | 1260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:33:20 has no hits.
FMO04450.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:59 Download gff for
FMO04450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..1369 | 33..1109 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:47 Download gff for
FMO04450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..1369 | 33..1109 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:14 Download gff for
FMO04450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 247..1343 | 33..1109 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:14 Download gff for
FMO04450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15846849..15847105 | 37..292 | 99 | -> | Plus |
| 3R | 15847170..15848006 | 293..1109 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:59 Download gff for
FMO04450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11672571..11672827 | 37..292 | 99 | -> | Plus |
| arm_3R | 11672892..11673728 | 293..1109 | 97 | | Plus |
