FMO04451.5prime Sequence
689 bp (689 high quality bases) assembled on 2008-07-30
> FMO04451.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTTTCAAAATCG
CAGCTATTACTGCTCGTTGTCGGGTTCTGCCTGAATGCAGCCGTCTCGGC
TGACGTGGACTGCAGCAAGCGGCCATCGTTTGTCAATCCCAAAACCTGTT
GTCCAATGCCGGACTTCGTGACCGCCGAGTTGAAGCAAAAGTGCATCAAG
TTTGACATGACTCCGCCGCCGCCGCCGGATGGGGAAGCAAGTGGATCCTT
TGAGAGCAAGCGTCGTCATCATCATCCGCATCCCCCACCATGCTTCTTCT
CCTGCATCTTTAACGAGACTGGAATCTATCAAAACCGGAAACTGGATGAG
GCAAAGCTGAACGCCTACTTGCAGGAGGTCTTCGAGGACAGTTCTGATCT
GCAGACCACGGCCACCCAGGCCTTCACCACCTGTGCAACCAAAGTCGCGG
ATTTCGAGGCCAATTTACCTCCTCGTCCGGCTCCATCTCCGCCACCCGGA
TTCCCCATGTGTCCTCACGATGCTGGTCACCTCATGGGCTGTGTGTTCCG
CAATATGATGAAGAATTGCCCAGACTCAATACGGAATGATTCCCAGCAGT
GCACTGACATGAAAGAGTTCTTCACCAAGTGCAAGCCACCTCGTGGTCCT
CCTCCTTCCGCCGAAGATATGGCAAGCTTTCTAGACCAT
FMO04451.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp49a-RA | 780 | CG30052-RA | 36..671 | 36..671 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12690168..12690548 | 671..291 | 1905 | 100 | Minus |
| 2R | 25286936 | 2R | 12690610..12690817 | 290..83 | 1040 | 100 | Minus |
| 2R | 25286936 | 2R | 12690873..12690920 | 83..36 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:04 has no hits.
FMO04451.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:15 Download gff for
FMO04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp49a-RA | 36..675 | 36..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:04 Download gff for
FMO04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp49a-RA | 12..651 | 36..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:45 Download gff for
FMO04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp49a-RA | 36..675 | 36..676 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:45 Download gff for
FMO04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12690164..12690548 | 291..676 | 99 | <- | Minus |
| 2R | 12690610..12690816 | 84..290 | 100 | <- | Minus |
| 2R | 12690873..12690920 | 36..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:15 Download gff for
FMO04451.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8577669..8578053 | 291..676 | 99 | <- | Minus |
| arm_2R | 8578115..8578321 | 84..290 | 100 | <- | Minus |
| arm_2R | 8578378..8578425 | 36..83 | 100 | | Minus |
