FMO04452.5prime Sequence
467 bp (467 high quality bases) assembled on 2008-07-30
> FMO04452.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTTCCTACTGCGA
CAAGTGGCCAGGAGCGGATTGCAAAGAAATCTAATCCTAATGCGGCATGC
AACCGCTTCCACATCCGCGAATCCCGAACTTAGTGTCCAGGTGAGCGAGA
GCTGCTTGAAACGGCTCCGTGAGATCTGCGTGGATGGATCTTTCCTGCGT
GTGACCGTCGAAGGAGGCGGATGCTCCGGCTTTCAGTACAAATTCGATTT
GGATAAGCAGCTGAACGAGGATGACCGACAGTTTGGCGAGGCTGAGGCCA
AGGTGGTGATCGATACAGTCTCGCTGGAGTACTGCAGCGGCGCCACCGTG
GACTACCATAGCGAACTAATACGCGCCGGTTTCCGGATGGTGGCCAATCC
GCTGGCGGAACAGGGCTGCTCCTGCGGCTCCTCCTTCTCAATCAAATTGG
CAAGCTTTCTAGACCAT
FMO04452.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13623-RB | 563 | CG13623-RB | 96..512 | 33..449 | 2085 | 100 | Plus |
| CG13623-RA | 725 | CG13623-RA | 258..674 | 33..449 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24529824..24530198 | 449..75 | 1875 | 100 | Minus |
| 3R | 32079331 | 3R | 24530258..24530301 | 76..33 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:58 has no hits.
FMO04452.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:50 Download gff for
FMO04452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13623-RA | 258..682 | 33..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:48 Download gff for
FMO04452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13623-RA | 258..682 | 33..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:00 Download gff for
FMO04452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13623-RA | 258..682 | 33..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:00 Download gff for
FMO04452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24529816..24530196 | 77..458 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:50 Download gff for
FMO04452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20355538..20355918 | 77..458 | 99 | <- | Minus |
