FMO04459.5prime Sequence
490 bp (490 high quality bases) assembled on 2008-07-30
> FMO04459.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGATCCAGCAACAGC
GCCAGAAAATCGAGGCCGCGGTAACGGAGATGATCGACGACATGGACAAG
ACGCACCTACGCAAAATGCAGAATGAGATGCACTTGTGTGCGGCCAAGTG
CTGCCAGGATGGAACCTCCAGCGTGGACAGTGTTCAGAGATGTGTGGATC
GATGCTCCGCGCCCATGACGAGGGCACAGAACTACGTTCAACACGAATTG
GGCGAGTTCCAGGGCAGACTTCAACGTTGCGTCATGCAATGCAACGACGA
TGTGAAGGTGAAAATGCCGCCCAGTCCCAATGAGGATCAGATAGCCAAGT
ACACCGACCAATTCGAGCGCTGTGCCATCCAGTGTGTGGACAAGCATGTG
GGCCTCATTCCCGGCATGATGAAGACCATGAAGGCTGTGCTCTCCAAGGG
ACCCGAGAGCATTCCCCAAGTCGCAAGCTTTCTAGACCAT
FMO04459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5323-RA | 783 | CG5323-RA | 102..539 | 35..472 | 2160 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18615569..18615755 | 286..472 | 935 | 100 | Plus |
| 2R | 25286936 | 2R | 18615305..18615472 | 119..286 | 825 | 99.4 | Plus |
| 2R | 25286936 | 2R | 18615161..18615247 | 35..121 | 420 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:25 has no hits.
FMO04459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:25 Download gff for
FMO04459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5323-RA | 96..544 | 28..479 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:03 Download gff for
FMO04459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5323-RA | 75..523 | 28..479 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:29 Download gff for
FMO04459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5323-RA | 96..544 | 28..479 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:29 Download gff for
FMO04459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18615308..18615472 | 122..286 | 99 | -> | Plus |
| 2R | 18615570..18615760 | 287..479 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:25 Download gff for
FMO04459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14502813..14502977 | 122..286 | 99 | -> | Plus |
| arm_2R | 14503075..14503265 | 287..479 | 98 | | Plus |
