Clone FMO04463 Report

Search the DGRC for FMO04463

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:44
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14550-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04463.5prime Sequence

527 bp (527 high quality bases) assembled on 2008-07-30

> FMO04463.5prime
CGTATAGCATACATTAAACAAAGTTATCAGTCGACATGCCGGAACACACT
CCACCTCCGACTCCCCATAGGGCGGTCTATGGTTTCGCCTTCTATATGCT
GTTCACGGTCCTCTTCCTCGTATACGTGACTTGGGCGCTGCTGCCAGTGG
AGTTTGGTCTGCACTCGTATCTGCCGGACAAGTATTTTGCCGTATTTGTG
CCTTTTCTGGTGCTGGTCTTCGCCTGGTTCTTTGCCTTCCTCATCTATCC
TGCCATAAATCTATCGATGACAGTGGATGTTGATTCCATTGCCTCGGTGG
TGGATCCAAAGCTGGCACTGCCCAAGGGGACAGAGTTCACCTCCTGGTCG
CAGTTGCAAAAAGGCAAGGTCAGCCAGGATTCCGCATCAAAGAAGGCCTC
TCCAGTGAACTGCAACCTGTGCAGGACTTTCCACCAACCTGTGACACGTG
CACCTATTCCACCACTGCGTTTTCTGGACCTCCAGGAAGTAAATACAGCG
TATTATAACGCAAGCTTTCTAGACCAT

FMO04463.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG42498-RA 814 CG42498-RA 338..811 36..509 2355 99.8 Plus
CG14550-RA 814 CG14550-RA 338..811 36..509 2355 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26057350..26057823 509..36 2355 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 19:14:46 has no hits.

FMO04463.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:31 Download gff for FMO04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42498-RA 330..814 28..513 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:10 Download gff for FMO04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14550-RA 330..814 28..513 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:02 Download gff for FMO04463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14550-RA 330..814 28..513 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:02 Download gff for FMO04463.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26057346..26057831 28..513 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:31 Download gff for FMO04463.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21883068..21883553 28..513 98   Minus