Clone FMO04464 Report

Search the DGRC for FMO04464

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:44
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptMED28-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04464.5prime Sequence

620 bp (620 high quality bases) assembled on 2008-07-30

> FMO04464.5prime
CGTATAGCATACCTTAAACGAAGTTATCAGTCGACATGGCCAGCAATGAG
TCCGGCGGCGGTAACCTGATGGACGAGTTCGAGGAGGCCTTCCAGTCGTG
CCTGCTGACGCTGACCAAACAGGAGCCGAATTCCGGGACAAACAAGGAGG
AAATCGATCTGGAGGTACAGAAGACCACAAATCGCTTCATAGACGTCGCC
CGCCAAATGGAGGCGTTCTTCCTGCAGAAGCGTTTTCTCGTCTCCACGCT
GAAGCCCTACATGCTGATCAAGGACGAGAATCAGGACCTGAGCATCGAGA
TTCAACGCAAGGAGGCACTCCTGCAGAAGCACTACAATCGCCTGGAGGAG
TGGAAGGCCTGCCTATCGGACATCCAACAGGGCGTACACAGTCGCCCCAC
GCCGCCCATCGGCTCTGGAATGCTGCAAGGTCCCGGTGGCGGAATGCCAC
CCATGGGAGGTACACCGCCGCGACCGGGAATGATGCCCGGAATGCCTCCG
GGTGCAATGCAACCCGGCGGACCCATGCAGCCCAGTCCACACATGCTGCA
GGCACAGCAGATGCAGCAGCTCCGCATGATAAGCAGACAAATGCCACCCA
AAGCAAGCTTTCTAGACCAT

FMO04464.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
MED28-RA 743 CG5121-RA 99..666 35..602 2840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25477101..25477668 35..602 2840 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:12:42 has no hits.

FMO04464.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:27 Download gff for FMO04464.5prime
Subject Subject Range Query Range Percent Splice Strand
MED28-RA 99..670 35..606 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:30 Download gff for FMO04464.5prime
Subject Subject Range Query Range Percent Splice Strand
MED28-RA 99..670 35..606 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:04 Download gff for FMO04464.5prime
Subject Subject Range Query Range Percent Splice Strand
MED28-RA 99..670 35..606 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:04 Download gff for FMO04464.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25477101..25477672 35..606 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:27 Download gff for FMO04464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21302823..21303394 35..606 99   Plus