FMO04468.5prime Sequence
433 bp (433 high quality bases) assembled on 2008-07-30
> FMO04468.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCACTTTAGTATAA
CAAATTCTCGCCAAGATATGAAGCCGTATTTAGATTCAGATTATTCCATC
AGTCGCAATTTGCGTCAGAGACATAGAAAAAAAGGAGTTTCTAACGAATA
CTCAAATTATTTAGATTCCGAAAATAAAAAAAAAGGCAGAAAGAAATGTC
AAAATAGCGCATATGATGAATACGGAAATATTCGCTCAAACGGTCTGGAC
ATATGCGACTGTATGAATCAAGAATGTGATGGTTGCTGGTATAATTGCCG
AAGTTGTGGCTCTACCAGGTGTGGTCCCCAATGTCGCTCGAATCGAAAGT
TTTTTTATGAGGACATAACATATGACGGTAAAGATTTAAATATTCAAAAT
AAATATATACCAAGAGCAAGCTTTCTAGACCAT
FMO04468.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14464-RD | 1289 | CG14464-RD | 28..409 | 34..415 | 1910 | 100 | Plus |
| CG14464-RC | 637 | CG14464-RC | 28..409 | 34..415 | 1910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 4829273..4829494 | 34..255 | 1110 | 100 | Plus |
| 2R | 25286936 | 2R | 4829547..4829707 | 255..415 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:35:17 has no hits.
FMO04468.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:12 Download gff for
FMO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 24..416 | 28..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:49 Download gff for
FMO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 50..442 | 28..423 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:13 Download gff for
FMO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14464-RC | 24..416 | 28..423 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:13 Download gff for
FMO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 4829269..4829493 | 28..254 | 98 | -> | Plus |
| 2R | 4829547..4829714 | 255..423 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:12 Download gff for
FMO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 716774..716998 | 28..254 | 98 | -> | Plus |
| arm_2R | 717052..717219 | 255..423 | 98 | | Plus |
