FMO04470.5prime Sequence
551 bp (551 high quality bases) assembled on 2008-07-30
> FMO04470.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGCCAAGCAA
AACCCAAAAAAGTTAAAGTGGGCGCTGGACTTTAACGGGAGCAAAAATGC
TGATATTCCTTCGCCGCTGGGCTACAATCCATCTGCTTTGGTGAACCAGA
GTGAAGTGGTGCGCGACCAGCGCCTGGTCATCAAGAAGTCGTGGGACCTT
GCCCTGGGACCTCTTAAGAACATTCCCATGAATCTATTCATCATGTACAT
GTCAGGAAACTCGATTTCCATTTTTCCCATCATGATGGTCGGCATGATGC
TGATCCGGCCTATCAAGGCCATCTTCACCACCCAGGTGACTTCCAAAATG
GCGGAGGGGGCCCAGGGAACTGGCCAGCGCATCGTCTACTTCCTGGGCAA
CCTAGCAAACGTGGCTTTGGCCCTCTACAAGTGCCAGAGCATGGGGCTCC
TCCCCACCCACGCCTCCGATTGGTTGGCATTTGTCCAGCCTCAGACACGC
CTGGAATATTACGGCGGAGGAATTTCGTTTGTCGCAAGCTTTCTAGACCA
T
FMO04470.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11137-RB | 957 | CG11137-RB | 91..589 | 35..533 | 2495 | 100 | Plus |
| CG11137-RA | 644 | CG11137-RA | 91..589 | 35..533 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22867543..22867854 | 533..222 | 1560 | 100 | Minus |
| 3L | 28110227 | 3L | 22867907..22868038 | 221..90 | 660 | 100 | Minus |
| 3L | 28110227 | 3L | 22868097..22868153 | 91..35 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:04 has no hits.
FMO04470.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:37 Download gff for
FMO04470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11137-RA | 86..595 | 28..542 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:50 Download gff for
FMO04470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11137-RA | 77..586 | 28..542 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:23 Download gff for
FMO04470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11137-RA | 86..595 | 28..542 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:23 Download gff for
FMO04470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22867536..22867854 | 222..542 | 98 | <- | Minus |
| 3L | 22867907..22868036 | 92..221 | 100 | <- | Minus |
| 3L | 22868097..22868156 | 28..91 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:37 Download gff for
FMO04470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22861007..22861136 | 92..221 | 100 | <- | Minus |
| arm_3L | 22861197..22861256 | 28..91 | 93 | | Minus |
| arm_3L | 22860636..22860954 | 222..542 | 98 | <- | Minus |
