FMO04471.5prime Sequence
848 bp (848 high quality bases) assembled on 2008-07-30
> FMO04471.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGAACAAGAGCGATG
GAAACGAGAGCTTTGCTCTGGACAGTCTCCCGGAAAACATTCGTTACCCT
TTCGGAAAACGAGAACTGGAAATCCTGGAGAAGCAACTAGATCGAATTGT
TTTGATATACCAGGTGGATACCACATACCACAGTGCACTAAAGGACATAA
AGGATCAGAAGATCATATCGCTGCTGGTGGAGCCCAGTTTTTACGGACGA
CATCACCCCACGTCTATTTTGGTGGTAGCCACGTGCAATGGAACGTACAT
TTTCGACATCAAGGCCCTTGGCTTGATATTTCTGGAACTGGCCAAGATTC
TGGAGGCGGATCAGCCGCGCAAGGTAATCCACTACAGCCACCGGATCGCC
GATCATCTGTTGCATAGGCAACGCATCTCGTTGGGAGGAATATTTGATAC
CTTTGTGGCTGTATGCCTGAGCAGCAACACAAGAATTCCGTACACCTTGC
CAGAGGCTATATCTCTCGTCTTCGGACTACCCATGGAGAAGGTGACTGGA
GGCTGTGAGTCGCAGCGTAACTTCACTGCTCGTCCACTGACCCACAGTCA
AATGAGATACTTGGCCAAGTTGGTCCAGCTTCAACACATAATGCACGATC
ATTTGAATTATAGTCACATCTTTTGCGCCGAGGTTTATCGCATATCCTTA
GAGTTCAGCCACAGCTACTACGGCTTACGGTCCTGCGACGTCGCCATAAA
CATGGCACCTGCCAGTAGCTTCGGGTTCCAACTCTTAGATTCATTCTGCA
AAAAGGCCGACAAGGAACTCGAGCGTGTCGCAAGCTTTTCTAAACCAT
FMO04471.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11263-RB | 1017 | CG11263-RB | 48..837 | 35..824 | 3950 | 100 | Plus |
| CG11263-RA | 1065 | CG11263-RA | 96..885 | 35..824 | 3950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13006912..13007701 | 35..824 | 3950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:00 has no hits.
FMO04471.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:35 Download gff for
FMO04471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..885 | 35..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:27 Download gff for
FMO04471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 89..878 | 35..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:41 Download gff for
FMO04471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11263-RA | 96..885 | 35..824 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:41 Download gff for
FMO04471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13006912..13007701 | 35..824 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:35 Download gff for
FMO04471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13000012..13000801 | 35..824 | 100 | | Plus |
