FMO04472.5prime Sequence
378 bp (378 high quality bases) assembled on 2008-07-30
> FMO04472.5prime
ATACATTATACGAAGTTATCAGTCGACATGAAGTTACTTGAGCCTCAGAC
GACCATTAGTCCTGAACCGGACATACTGCATCCGGACGACGGTCAATACA
TATGGCTGCCAATTTCCGTGCTCGTTGGCATTTTCGTTCTGGCTGCACTG
GTCTACGCCATGTCACGTAGTCGCTGTCGGAATTCCTGGGATTGCCTAAA
GAGCAGGAAGGCTCCGCGAAGTGGATACATCAATGTGGATGAGGAGGATT
CCGATGTGCCCATGGACTGCGGAGATGAACTGGGAGATCAAAGGACTACT
GCTACTCTCCTCACTGGTCGCCTCCACATTCAGGATGGAGCGAATAACGC
CTCCAATGCCGCAAGCTTTCTAGACCAT
FMO04472.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5039-RA | 719 | CG5039-RA | 95..427 | 28..360 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25678968..25679159 | 146..337 | 945 | 99.5 | Plus |
3R | 32079331 | 3R | 25678777..25678901 | 28..152 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:36 has no hits.
FMO04472.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:34 Download gff for
FMO04472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5039-RA | 95..427 | 28..360 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:41 Download gff for
FMO04472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5039-RA | 66..398 | 28..360 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:43 Download gff for
FMO04472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5039-RA | 95..427 | 28..360 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:43 Download gff for
FMO04472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25678777..25678899 | 28..150 | 100 | -> | Plus |
3R | 25678973..25679158 | 151..336 | 100 | -> | Plus |
3R | 25679214..25679237 | 337..360 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:34 Download gff for
FMO04472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21504499..21504621 | 28..150 | 100 | -> | Plus |
arm_3R | 21504695..21504880 | 151..336 | 100 | -> | Plus |
arm_3R | 21504936..21504959 | 337..360 | 100 | | Plus |