FMO04475.5prime Sequence
1234 bp (1049 high quality bases) assembled on 2008-07-30
> FMO04475.5prime
ATTATACGAAGTTATCAGTCGACATGTTGAAATTGCAAAAGAAAACTGAA
GATTCGAAATTCGCAGTGTTCTTGGATCACAAGACACTTATAAACGAAGC
ATATGACGAATTTAAGCTCAAGTCCGAACTGTTCCAGTTCCATGCCAAAA
AGACGGACAAAGGCATTGAGGAAGACAAGACCAGGAAGCGCAAAAGGAAA
GCCGGCGTAGAAGATGCGTCGTCCTTGGAGGATTTACACTTAGTGAATGA
ATATCTAGAGCTTCTGAGCAAGCCCGTTGAACCGGAGGACAGTTCACCGA
TGAAGAGGCACTGGGAGGATGGCTACAACGTGCCCCAGTTGCATGGAGCC
AACGAAAGTGGACGGATGCAGCGGTTTCTGAGAGTTGATGGATCCCGTGG
CGTGTACTTGATTCCCAATCAATCCCGATTCTTCAACCACAATGTGGACA
ATCTGCCTGCACTACTGCACCAACTTCTGCCCGCCTACGATCTCATCGTG
CTGGATCCTCCGTGGCGGAATAAGTACATCCGCAGGCTGAAGCGGGCCAA
GCCGGAGCTGGGATACTCGATGCTGAGCAATGAGCAATTGTCGCACATAC
CGCTCTCGAAGCTTACGCACCCACGGTCACTGGTGGCCATCTGGTGCACC
AATTCGACGCTGCATCAGTTGGCCCTGGAGCAGCAGCTGCTGCCCAGTTG
GAATCTCCGGTTGCTCCACAAGCTCCGATGGTACAAACTTAGCACAGACC
ATGAACTAATTGCTCCCCCGCAGTCGGATCTCACCCAGAAGCAGCCTTAC
GAGATGCTCTACGTGGCCTGTCGCTCCGATGCTTCTGAAAACTATGGAAA
AGATATCCAACAGACCGAGCTGATCTTCAGCGTGCCCAGCATTGTGCATT
CCCACAGCCACCACTGCTGTCTTGGCTGAGGGAGCACCTTCTGTTGGATA
AAGGACCAGCTGGAACCAAACTGCCTGGAGCTGTTTGCCCGATAATCTGC
ATCCCCACTTCACCTTCAATTGGCTTAAAAGTGCCTCAAACTGAATGGAC
GAAAAGGCTTATATGAAGTTCGTAAAGGTAAGAACTTTGCAACCAGGAGG
AGGTAAATGCCAGCTTCTAGAACATTGCGTTTGGGCGCGCGTCAAGGTAG
TTGCTATATTGAGCTTAACCTAGCATCACTAGGCTAGAAATCGTGCTCAT
GAACATATGGCTTGAAATCTCTCACCCTAATTAG
FMO04475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14906-RC | 1177 | CG14906-RC | 33..1109 | 24..1108 | 5120 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16650049..16651125 | 1108..24 | 4895 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:56 has no hits.
FMO04475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:36 Download gff for
FMO04475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 25..1114 | 13..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:36 Download gff for
FMO04475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14907-RB | 1143..2232 | 13..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:13 Download gff for
FMO04475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RC | 25..1114 | 13..1115 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:13 Download gff for
FMO04475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16650049..16651133 | 13..1108 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:36 Download gff for
FMO04475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12475771..12476855 | 13..1108 | 98 | | Minus |
