FMO04477.5prime Sequence
1212 bp (1037 high quality bases) assembled on 2008-07-30
> FMO04477.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACGGCATAAAC
AAGTACAACGAGTTTGTGGCGCTGCACAAGCCACAGCTGGAGTCCTCCGG
TATTCCGCTGATATTTTGGCCGGCTCTGTTCCGAAAACTGACCACGGAAA
CCTTCGATGCCGGCGAGGCACTCCAGTTGATGCTGATCGACTACGATGAG
GATGAACAGCAGAATCCGGCCGAGGACGATGACAGTCCCAACCCTGTGTT
CGCACTGGGCGTAGCCCGGGAGCAGGGCATAAAGGCCAGTGATCCTCAGG
CCATCTATTTGGTCGATCACGCCTGGACGTTCCGGCTAAACGGTGCTCGG
CAGCAGCTGGAGGAGTATCCGCAACTGGCGGAGCGACTTTCTGCCATCAC
TGGCGTTGACCTTGAGCTGAAGGATCGGGTCGACAAGATCCTGCGCCGTC
TGTGGAAGTACTGCCACGCCTACTCCATCGGCAGCGAAGGCTTGTCGGAC
GAGGAGCGCCAGCCCATCTGGTATGTGATGGACGAAGTCGGCTCGGCTGT
GAACCACTCGGACGATCCCAACTTTCGACTTGTTCCGCTGCTCTACCTAA
ACACCCAAACCACATACAGTGTGCTCTTTCCGATTCGGGACTGCGATGTC
GGAGAAGCGGTGACCCGCGATATGGTGGAGCACGTGGCAAAGGATGCGCC
CCAGCGGCCTGCGCTGCTTTTACCCTGGCGCGATGCCGACCTCACGGGCG
AAAGCTTCTTGCAGGTTGAACCCCGGGCAGATTACTTTACCAGCGGTCAC
ATCCCTGAGACCTATCCCAAAGGCGATACTGTTCCACTGCCAGCCAGGTC
ACGTTGCGATCCGCTGAACGTGTATGCAGAGTACGAGGTGGTGCCCCGTC
ATCTAACTTCGTCCGAGTTCATCCTAGTTAACAACGGCAGACGAGGCGGA
TGTCCTTTGGCTCACACACCCACTTCAGGAATTTCGAGGATTTTGCAGAT
AGGTCGCCCGGGCAAGTTCATCATCAGTTTCGTCGAGTACTGATCACCAT
CAAGGATTCTCTAGCCATTGTGGCCGCCGGGCGCAAGAACACATGATAGC
TACGCTGGAACGTTCGCATGCTCCCACTCACTAATAATTCTGTCACGAGT
AGGATCCGGCTCAATCACGGAGAGACGCAAAGGCTGCGCACGAACACTGT
GGGATATATTCA
FMO04477.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1550-RA | 1961 | CG1550-RA | 43..1125 | 36..1110 | 4950 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7810964..7811986 | 1057..36 | 4755 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:16:39 has no hits.
FMO04477.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:11 Download gff for
FMO04477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 36..1104 | 27..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:13 Download gff for
FMO04477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 43..1111 | 27..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:35 Download gff for
FMO04477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1550-RA | 36..1104 | 27..1092 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:35 Download gff for
FMO04477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7810964..7811993 | 27..1057 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:11 Download gff for
FMO04477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3698469..3699498 | 27..1057 | 98 | | Minus |
