FMO04485.5prime Sequence
646 bp (646 high quality bases) assembled on 2008-07-30
> FMO04485.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTATACCATTC
TTATTTTGGCTTTGGGCCTGTTTTGCGTAAATGCATTGGTGGCTCCTGTT
CCCAGCGCCCTGGACTCTTCGTCAGAACTGGACGATGTGACCGATGGTAG
CTTGGAGGTGGAGGACTTTGGCGTGCTGAGTACGACCTACAAATCCCTAA
AGATCGCTCTGCGAAGCATCAAGGGACTCAATTGCATAATCAAGTGGGTG
GCGGGCATCAAGGACAGTGCGACCCAATTTAACACGGACGTGGTCGTGTG
CGGCGTCACCGCCAGCAAGGATGTGACCAAATTGATCAACGCCAACAATA
AGATCCTCAGCACTTGCAACGACCTCATCAATCTGAGGTCCAACACTTGC
CCCCAAACGGACGACGAGGAGACGAAGGTCTCTGGCAGCTGCTTTGTTAA
GACTCTGCGCAAGGTGTGGTCCCTAAAGAAGCAAGTGGACAATGCCATCA
AGCTGGCCAAGAAGATCCCGCAAACCGGTCCCAATGCCGTCGCCTGTGTC
TCCGATGCCGTCAACACCCTGACCACCTACTACACCGCCTTTCCCCAGAA
CATCATCAGCTGCTCCAAGCTGACTTCTGCAAGCTTTCTAGACCAT
FMO04485.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8661-RA | 677 | CG8661-RA | 27..621 | 34..628 | 2975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17283818..17284369 | 628..77 | 2760 | 100 | Minus |
X | 23542271 | X | 17284428..17284474 | 80..34 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:55:55 has no hits.
FMO04485.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:39 Download gff for
FMO04485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 27..621 | 34..628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:59 Download gff for
FMO04485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 10..604 | 34..628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:49 Download gff for
FMO04485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8661-RA | 27..621 | 34..628 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:49 Download gff for
FMO04485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17283818..17284369 | 77..628 | 100 | <- | Minus |
X | 17284432..17284474 | 34..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:39 Download gff for
FMO04485.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17177851..17178402 | 77..628 | 100 | <- | Minus |
arm_X | 17178465..17178507 | 34..76 | 100 | | Minus |