FMO04486.5prime Sequence
393 bp (393 high quality bases) assembled on 2008-07-30
> FMO04486.5prime
TATAGCATAAATAAGACGAAGTTATCAGTCGACATGTCGCAGTTTAGCAC
CGTTGCCGCATTCCTACTCCTCGGCCTGGTCGTCATCCTTGGCGGCCACG
TTGGCCAGGCGGCCGTTGCCAAGGTCAAACTGAACAATTCATCGCATCCC
GGCAAGTGTGTGCTGGACACGAACACGATCCTGTCGCCCGGGGAGACGGG
TCTGGCGCCGGATCTGCCATGCGTGCGGGCCGAATGCCATGCGGATGGCT
TGGTGACCTTCAAAACCTGCGATGCAGTCGCTCCGCCACCGGGCTGCAAG
CAGCGCGACTTTGTGAACATCAATCGCGAATTTCCCGCTTGCTGCGAGCG
GAAATACAATTGCGACAAGCACATCGCAAGCTTTCTAGACCAT
FMO04486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2444-RB | 913 | CG2444-RB | 373..714 | 34..375 | 1710 | 100 | Plus |
| CG2444-RA | 638 | CG2444-RA | 98..439 | 34..375 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11704509..11704741 | 375..143 | 1165 | 100 | Minus |
| X | 23542271 | X | 11704820..11704928 | 142..34 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:06:56 has no hits.
FMO04486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:01 Download gff for
FMO04486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2444-RA | 94..442 | 26..379 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:42 Download gff for
FMO04486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2444-RA | 80..428 | 26..379 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:48 Download gff for
FMO04486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2444-RA | 94..442 | 26..379 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:48 Download gff for
FMO04486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11704506..11704741 | 143..379 | 99 | <- | Minus |
| X | 11704820..11704932 | 26..142 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:01 Download gff for
FMO04486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11598539..11598774 | 143..379 | 99 | <- | Minus |
| arm_X | 11598853..11598965 | 26..142 | 96 | | Minus |
