FMO04488.5prime Sequence
892 bp (396 high quality bases) assembled on 2008-07-30
> FMO04488.5prime
AGGGAAGTTATCAGTCGACATGCTCTTATCCTACCGATGCTTCTACTCGG
TGCTGCTGTCCACCATACCCAGTATTATGGTGGTACTAAGCTCTGCATCC
TCCGGCTCCATACAGCTGCCCACTGTGCGCAAGTGCGGCGGTGGCAGATC
TGCGGGAGCAGCCCACACAATGGCCATGAATTTGGCGGCCTACGGGCTGC
TGGAGAATCGGATTAGCACTCTGGAAGCACCGCGACAAACGCACTGGACG
AAAAAGTTCCTGGCCAAGCGGGAGGCGACTCCCCATTCGGCGCCGTATGT
GGTCAGCATCCATATGATGACACCCGATCAGGGACTGGTCCACTACTGTG
CCGGCACCATCATCAACGAGCACTGGATCCTGACGGCGGCCCACTGCCTC
AGCTCACCGCAGGCGGTGGAGAACTCGGTCATTGTGGCGGGCAGCCACGA
TATTCACGATCAGAAGGGCGAGGCGAGCAACATTCAAATGCGACACATCG
ACTACTACGTGCGACACGAGCTCTATCTCGGCGGAGTGAATCCCTACGAC
ATCGCGCTAATTTACACCAAGGAGCCCCTGGTCTTTGACACCTATGTCCA
ACCCAGCAACGCTGCCCGGAGCAGGATGCCCAGCCGGAGGGATATGGGAA
CTTTTGTACGGCTGGGGCAATGTCTCGATGACTGCGGTACCCATTATCCG
CACCGGCCTGCAGGAGGCAACATGCCCATACTGGACATGGAGTTATGCGA
CCAGATTCTCGCCCGCTCCGGACTCCCATTGCAGAGACCCATCTGTGCAC
TGGCCCGCTGACGGGAGGCGTTAGCATCTGCACCGCCGACTCCGGGCGGA
CCATTGATTCAGCATTGCTTGCGAGGAGCACTTTCAAGCAGG
FMO04488.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7142-RA | 1342 | CG7142-RA | 237..1105 | 19..892 | 3975 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18278426..18279286 | 883..19 | 3725 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:05:44 has no hits.
FMO04488.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:48 Download gff for
FMO04488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7142-RA | 245..1113 | 19..892 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:00 Download gff for
FMO04488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7142-RA | 245..1113 | 19..892 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:36 Download gff for
FMO04488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7142-RA | 237..1105 | 19..892 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:36 Download gff for
FMO04488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18278418..18279286 | 19..892 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:48 Download gff for
FMO04488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14104140..14105008 | 19..892 | 97 | | Minus |
