FMO04490.5prime Sequence
893 bp (893 high quality bases) assembled on 2008-07-30
> FMO04490.5prime
CATAAAACGAAGTTATCAGTCGACATGGAGTTCCTGACTAAAGTGTGGGC
CAAAGAGGCAACAGCGCCCGAGGCAATAGAAGCCATCACCGGCGCAGCGC
AAGAAAAACAAAATGCAAAGACTGAAAAAGCATCTGCCAGTAAGGAGACG
AGCACCGAAGAAACCACCACTGCTCAAAAGGATTGGGGCTACGACCTTTA
TCCGGAGCGAAGGGGCGAAACCTTCAAGCCCAAATGGACACGAGTCCTGT
TCGGCTTGGAGGGGCAGGAGAACATTGATCGTTTCAAGTGCGAGGAGAAT
GTGTACTGGTGTGTCAAAAATGGTCCGCTGGTCAAACTGATGATGGGAGC
ACTGAAAAGTTCCGGTTGTCCCATCGATCTGCGCCGACACATCTCATGCG
AGGTGTGCGACCCCACAGTCACCGGCGGTTACGATCCCAAGCTCAACCAG
ATCGTGGTCTGCCAGAATATGGCCAGGAACAAGAGCATGGTCCATGGAGT
GCTAACGCACGAGATGATTCACATGTTCGACTACTGCAATAACGACATGG
ACTTCCGCAACGTGGACCACCTGGCCTGCACAGAGATCAGGGCGGCAAAC
CTGGCGCATTGCTCCTTCTTGAGCGCCATGTTCCAAGGAGATGCCTCGCC
ATTTAATGTCAAGGAAGCGCATCAGAACTGCGTCAAGTCCAAAGCCCTAG
CTTCCGTGCTCGCTGTTCGCAATATTAGCAAAGCAGATGCCGTCGCTGCT
GTGGAACGTGTCTTTCCCAAATGCTATGCAGACTTGGAGCCCATTGGCCG
GAGAATCCGTCGCAATTCCACGGACCAGCAGAAGGCTTACATGGAGGCCA
CCCATGTATGGCTATGATGTATATGCAAGCTTTCTAGAACCTT
FMO04490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5131-RA | 1051 | CG5131-RA | 78..926 | 25..874 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17484578..17485228 | 25..675 | 3255 | 100 | Plus |
| 2L | 23513712 | 2L | 17485298..17485499 | 672..874 | 965 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:18 has no hits.
FMO04490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:15 Download gff for
FMO04490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5131-RA | 78..937 | 25..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:04 Download gff for
FMO04490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5131-RA | 61..920 | 25..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:15 Download gff for
FMO04490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5131-RA | 78..937 | 25..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:15 Download gff for
FMO04490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17484578..17485228 | 25..675 | 100 | -> | Plus |
| 2L | 17485302..17485510 | 676..883 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:15 Download gff for
FMO04490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17484578..17485228 | 25..675 | 100 | -> | Plus |
| arm_2L | 17485302..17485510 | 676..883 | 97 | | Plus |
