FMO04491.5prime Sequence
777 bp (777 high quality bases) assembled on 2008-07-30
> FMO04491.5prime
CTTATACGAAGTTATCAGTCGACATGAAGTGCTTTTTTATCCTGATAGCA
ACCAGTCTGGTGCTGAGTGCCTATGCCCAGGACGCGGCGGATTCTGACCT
GGAGCAGGTGGCATCCGCATCGGCACCGGATGCGGTGGCCGTGGAGGATC
AGGTGAGCGCCGCCAGCAGCTATGCCCCGCTGCAGGATAAGAAGCAGGAG
AAGCGCTATGTTGGTGGATACGGTGGCTACGGAGCGGGCTACGGCGCGGG
ATACGGCGGCTATGGCGCCGGATATGGCGCAGGATACGGCGGCTATGCCT
CTGGCCTGGGAGCCGGCTATGGAGGAGCGTACGGCAGTGGCGTCGGCGTT
GGCGTGGACAGCTACTACAATCCGTACAGCTCGCGAGCTCTGGGTGGATT
AGATGGTGCTGCAGTGGCCGGATACGGAGGCTATGGATCCACTCTGGGCG
GCTATGGATCCGCTTTGGGTGGCTATGGATCCGCTCTTGGTGGCTATGGA
TCGGGACTTAGTGGTTATGGTGGCTCCTACAACTCGAATCCATACGCCCT
GTCATACTACAACAGCAGGCTGGGCGCTGGAGCCGGCACTGGGTATCCGT
ACTACAACACCCGATTCGGCGCTGGGTGGCTATCCATCCAGTTACTATAC
GAGCAACTATGGCAACAGCGTGGTGGGCGGCGGCTTGGGCGCTTTGGGCG
GAGTGCCGCCCATCGGATCGGGCTATAACTACGGTTCCGGAATCTCGGGA
ACCGTCTACGCAAGCTTTCTAGACCAT
FMO04491.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2157-RA | 965 | CG2157-RA | 95..831 | 22..759 | 3665 | 99.9 | Plus |
| CG2157-RB | 1004 | CG2157-RB | 95..837 | 22..759 | 3595 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10869737..10870103 | 36..402 | 1835 | 100 | Plus |
| X | 23542271 | X | 10870181..10870538 | 401..759 | 1745 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:03 has no hits.
FMO04491.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:10 Download gff for
FMO04491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 91..831 | 16..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:43:43 Download gff for
FMO04491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 69..809 | 16..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:29 Download gff for
FMO04491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2157-RA | 91..831 | 16..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:29 Download gff for
FMO04491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10869737..10870103 | 36..402 | 100 | -> | Plus |
| X | 10870183..10870538 | 403..759 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:10 Download gff for
FMO04491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10763770..10764136 | 36..402 | 100 | -> | Plus |
| arm_X | 10764216..10764571 | 403..759 | 99 | | Plus |
