FMO04496.5prime Sequence
493 bp (493 high quality bases) assembled on 2008-07-30
> FMO04496.5prime
TTATACGAAGTTATCAGTCGACATGAGAGCAATACGAGTTCTGCTGATTT
TCCAACTGCTGGCTTGTCTAATGGCCGTAATATCGGGCTGCAACCAGGGG
TCCTGCCATCCGTTCATTGGCCTGAACAAGTGCAATGGTAATGGCTATAA
GGAGCCCAAACTTCCACCTCGGGATAACGCCTGCTGCGGTGCCCATTGCG
TCTACAATGGTCCAAGTTGTCAAAATCCCGGTCCCTGCGACAGCAAACCC
GTGAATCGTTGCATCCTGGACTCACATTGTGGCAAAGGCGTAGCCTTCTA
CTTCGTATGCAAGTCAGATTGTGAACTGATAAAGGAAAATGAAGCTCGCC
AGGCAGCTGGATATGCCCGTCTTCTTTCATTTTCGTGGGGCAAGCAGAAA
TGCGAGGGCATGAATTACAAATGCGGCATCAATTGTTGCTGTCGTGAGTA
TTGTCCTAAACGGTTTTGTAAATTTGCAAGCTTTCTAGACCAT
FMO04496.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31698-RB | 569 | CG31698-RB | 14..468 | 21..475 | 2275 | 100 | Plus |
| CG31698-RA | 491 | CG31698-RA | 14..468 | 21..475 | 2275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3173478..3173827 | 370..21 | 1750 | 100 | Minus |
| 2L | 23513712 | 2L | 3173306..3173412 | 475..369 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:37 has no hits.
FMO04496.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:29 Download gff for
FMO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..457 | 22..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:11 Download gff for
FMO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 1..457 | 22..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:47 Download gff for
FMO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31698-RA | 5..471 | 12..479 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:47 Download gff for
FMO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3173299..3173412 | 369..481 | 96 | <- | Minus |
| 2L | 3173480..3173836 | 12..368 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:29 Download gff for
FMO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3173299..3173412 | 369..481 | 96 | <- | Minus |
| arm_2L | 3173480..3173836 | 12..368 | 98 | | Minus |
