Clone FMO04503 Report

Search the DGRC for FMO04503

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:3
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11103-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04503.5prime Sequence

574 bp (574 high quality bases) assembled on 2008-08-04

> FMO04503.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGACCCT
CCTCATCGTCATCTTCGGCATCTTCCGCCTCGGGCGGAGCTGGAAACTCG
GCCTTCTATCCACTGGGACCGAATGTGATGTGCTCGTTTCTGCCGCGCGA
CTTTCTCGATTGCAAGGATCCCGTCGATCATCGGGAGAACGCCACGGCGC
AGCAGGAAAAGAAATACGGATGCCTGAAGTTCGGTGGTTCCACGTACGAA
GAGGTGGAGCACGCCATGGTCTGGTGCACCGTGTTTGCCGACATCGAGTG
CTACGGTAATCGCACCTTTCTGCGCGCCGGAGTGCCCTGTGTCCGCTACA
CGGATCACTACTTTGTGACCACACTGATCTACAGCATGCTGCTGGGTTTC
CTCGGTATGGATCGCTTCTGTCTCGGTCAAACGGGCACGGCTGTGGGCAA
ACTGCTTACCATGGGCGGCGTGGGCGTTTGGTGGATCATCGACGTCATCC
TCCTGATCACCAACAATTTGCTGCCCGAGGACGGCAGCAATTGGAATCCC
TATGTCGCAAGCTTTCTAGACCAT

FMO04503.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11103-RB 923 CG11103-RB 196..712 40..556 2585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13782654..13783170 40..556 2585 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:52:15 has no hits.

FMO04503.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:56 Download gff for FMO04503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 32..556 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:00:47 Download gff for FMO04503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 137..658 32..556 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:34 Download gff for FMO04503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11103-RB 191..712 32..556 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:34 Download gff for FMO04503.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13782649..13783170 32..556 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:56 Download gff for FMO04503.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13676682..13677203 32..556 99   Plus