Clone FMO04504 Report

Search the DGRC for FMO04504

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:4
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32284-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04504.5prime Sequence

358 bp (358 high quality bases) assembled on 2008-08-04

> FMO04504.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTGGCTGCGTATAA
TGTTTTTACTGTTGCTGGCTCATTGCCTCACGGCTTTGCCAGCTCCAGAG
TTTGACGACCACAACTCGAAGACTTGGAGTGCGGAAGAAGCCTGCAGCGA
AGTTACAACCACCACCATAATGGAAAACCAGGCTGATCCAACTTGTAGAA
CCTACGTTTATTGTTACGTGGTCAATGGATCAGTTTTGTCGTTGATTAAG
AGCTGCAAAGTGAACCAGTACTTTGATCCCAATTTGAAAATGTGCCGGTC
TGAAGTTCCAGATGAATGTTCTGCAATGGCACCAACCAACGCAAGCTTTC
TAGACCAT

FMO04504.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32284-RA 457 CG32284-RA 7..313 34..340 1535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3186759..3186899 61..201 705 100 Plus
3L 28110227 3L 3186963..3187101 202..340 695 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:16:08 has no hits.

FMO04504.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:47 Download gff for FMO04504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32284-RA 1..316 32..344 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:02:41 Download gff for FMO04504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32284-RA 1..316 32..344 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:18 Download gff for FMO04504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32284-RA 1..316 32..344 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:18 Download gff for FMO04504.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3186670..3186697 34..61 100 -> Plus
3L 3186760..3186899 62..201 100 -> Plus
3L 3186963..3187104 202..344 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:47 Download gff for FMO04504.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3186670..3186697 34..61 100 -> Plus
arm_3L 3186760..3186899 62..201 100 -> Plus
arm_3L 3186963..3187104 202..344 98   Plus